RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CITED2Q99967 270 aaPredicted RBP15.41■□□□□ 0.06
SOX4-201ENST00000244745 CRLF1O75462 422 aa15.41■□□□□ 0.06
SOX4-201ENST00000244745 CDK2AP2O75956 126 aa15.41■□□□□ 0.06
SOX4-201ENST00000244745 RBMY1FQ15415 496 aaKnown RBP15.4■□□□□ 0.06
SOX4-201ENST00000244745 SEM1Q6ZVN7 128 aa15.4■□□□□ 0.06
SOX4-201ENST00000244745 LENEPQ9Y5L5 61 aa15.4■□□□□ 0.06
SOX4-201ENST00000244745 MSMPQ1L6U9 139 aa15.4■□□□□ 0.06
SOX4-201ENST00000244745 ICOSQ9Y6W8 199 aa15.4■□□□□ 0.06
SOX4-201ENST00000244745 WISP2O76076 250 aa15.39■□□□□ 0.05
SOX4-201ENST00000244745 ACYP1P07311 99 aa15.39■□□□□ 0.05
SOX4-201ENST00000244745 A4D1N5 150 aa15.39■□□□□ 0.05
SOX4-201ENST00000244745 NUP210LQ5VU65 1888 aa15.39■□□□□ 0.05
SOX4-201ENST00000244745 COL4A4P53420 1690 aaPredicted RBP15.38■□□□□ 0.05
SOX4-201ENST00000244745 IGHV4-59P01825 116 aa15.38■□□□□ 0.05
SOX4-201ENST00000244745 TP73-AS1Q9UF72 201 aa15.38■□□□□ 0.05
SOX4-201ENST00000244745 BRWD1-AS2P59051 145 aa15.38■□□□□ 0.05
SOX4-201ENST00000244745 BUB3O43684 328 aa15.38■□□□□ 0.05
SOX4-201ENST00000244745 A0A096LPF7 62 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 PRSS47A8MTI9 375 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 F5H768 121 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 SPANXCQ9NY87 97 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 DEFB112Q30KQ8 113 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 ZFP2Q6ZN57 461 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 C16orf54Q6UWD8 224 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 CLPSL2Q6UWE3 100 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 U3KQE9 123 aa15.37■□□□□ 0.05
SOX4-201ENST00000244745 J3QLI3 93 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 DAD1P61803 113 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 LINC01620Q4KN68 170 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 HOXD3P31249 432 aaPredicted RBP15.36■□□□□ 0.05
SOX4-201ENST00000244745 ODF1Q14990 250 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 BAALCQ8WXS3 180 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 Q9H8V8 135 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 C19orf71A6NCJ1 209 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 DEFB136Q30KP8 78 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 Q8N9W7 124 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 ATP6V0E2Q8NHE4 81 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 RNF114Q9Y508 228 aa15.36■□□□□ 0.05
SOX4-201ENST00000244745 FAM236AA0A1B0GUQ0 79 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 FAM236BA0A1B0GV22 79 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 ELANEP08246 267 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 IGHV4-38-2P0DP08 117 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 IGKV1D-37A0A075B6S9 117 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 F8WEM9 126 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 IGLV2-8P01709 118 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 GDF5OSQ5U4N7 250 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 DSCR8Q96T75 97 aa15.35■□□□□ 0.05
SOX4-201ENST00000244745 TOMM6Q96B49 74 aa15.34■□□□□ 0.05
SOX4-201ENST00000244745 AJUBAQ96IF1 538 aa15.34■□□□□ 0.05
SOX4-201ENST00000244745 NOP10Q9NPE3 64 aaKnown RBP15.34■□□□□ 0.05
SOX4-201ENST00000244745 SPRY4Q9C004 299 aa15.34■□□□□ 0.05
SOX4-201ENST00000244745 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
SOX4-201ENST00000244745 PKDREJQ9NTG1 2253 aa15.33■□□□□ 0.05
SOX4-201ENST00000244745 NCOR1O75376 2440 aa15.33■□□□□ 0.05
SOX4-201ENST00000244745 CTRLP40313 264 aa15.33■□□□□ 0.05
SOX4-201ENST00000244745 ROS1P08922 2347 aa15.33■□□□□ 0.05
SOX4-201ENST00000244745 ARHGAP21Q5T5U3 1957 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 ZNF561-AS1K7EIQ3 104 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 RPL39P62891 51 aaKnown RBP15.33■□□□□ 0.04
SOX4-201ENST00000244745 RPL32P62910 135 aaKnown RBP15.33■□□□□ 0.04
SOX4-201ENST00000244745 DOCK10Q96BY6 2186 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 SHANK1Q9Y566 2161 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 LOXL1Q08397 574 aaPredicted RBP15.33■□□□□ 0.04
SOX4-201ENST00000244745 APRG1Q8IVJ8 170 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 Q8N7P7 452 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 PTH2Q96A98 100 aa15.33■□□□□ 0.04
SOX4-201ENST00000244745 A0A1B0GXF2 115 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 RBX1P62877 108 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 ADAMTS9Q9P2N4 1935 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 CRYGCP07315 174 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 C3orf56Q8N813 242 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 AKAP6Q13023 2319 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 IGLV1-47P01700 117 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 C1orf229Q6ZS94 237 aaPredicted RBP15.32■□□□□ 0.04
SOX4-201ENST00000244745 E9PLD3 99 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 A0A0B4J2C4 111 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 LINC00322Q6ZN03 302 aaPredicted RBP15.32■□□□□ 0.04
SOX4-201ENST00000244745 C5orf56Q8N8D9 126 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 TP53TG3Q9ULZ0 132 aa15.32■□□□□ 0.04
SOX4-201ENST00000244745 EP300Q09472 2414 aaPredicted RBP15.31■□□□□ 0.04
SOX4-201ENST00000244745 TRBV6-1A0A0K0K1D8 114 aa15.31■□□□□ 0.04
SOX4-201ENST00000244745 C9orf47Q6ZRZ4 202 aa15.31■□□□□ 0.04
SOX4-201ENST00000244745 SLURP1P55000 103 aa15.31■□□□□ 0.04
SOX4-201ENST00000244745 BLCAPP62952 87 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 DEFB1P60022 68 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 ORMDL1Q9P0S3 153 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 IGHV4-61A0A0C4DH41 118 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 A0A0J9YXV3 536 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 VPREB3Q9UKI3 123 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 PROP1O75360 226 aa15.3■□□□□ 0.04
SOX4-201ENST00000244745 RBM3P98179 157 aaKnown RBP15.3■□□□□ 0.04
SOX4-201ENST00000244745 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
SOX4-201ENST00000244745 RNF183Q96D59 192 aa15.29■□□□□ 0.04
SOX4-201ENST00000244745 EIF4EBP1Q13541 118 aaPredicted RBP15.29■□□□□ 0.04
SOX4-201ENST00000244745 CNOT1A5YKK6 2376 aaKnown RBP15.29■□□□□ 0.04
SOX4-201ENST00000244745 ZFP36P26651 326 aaKnown RBP15.28■□□□□ 0.04
SOX4-201ENST00000244745 IGKV3D-7A0A0C4DH55 119 aa15.28■□□□□ 0.04
SOX4-201ENST00000244745 J3KT08 172 aa15.28■□□□□ 0.04
SOX4-201ENST00000244745 GVINP1Q7Z2Y8 2422 aa15.28■□□□□ 0.04
SOX4-201ENST00000244745 TRBV10-2A0A0K0K1G8 114 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms