RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 HIGD1BQ9P298 99 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
HIF3A-202ENST00000244303 A0A087WX48 190 aa10.85□□□□□ -0.67
HIF3A-202ENST00000244303 AVPP01185 164 aa10.85□□□□□ -0.67
HIF3A-202ENST00000244303 DSCR9P59020 149 aa10.85□□□□□ -0.67
HIF3A-202ENST00000244303 RPL39LQ96EH5 51 aaKnown RBP10.85□□□□□ -0.67
HIF3A-202ENST00000244303 BBC3Q96PG8 261 aaPredicted RBP10.85□□□□□ -0.67
HIF3A-202ENST00000244303 MUC4Q99102 2169 aa10.85□□□□□ -0.67
HIF3A-202ENST00000244303 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 GNRH2O43555 120 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 IGLV1-40P01703 118 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 SRD5A1P18405 259 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 EDN2P20800 178 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 SUMO2P61956 95 aaKnown RBP10.84□□□□□ -0.67
HIF3A-202ENST00000244303 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
HIF3A-202ENST00000244303 CRYBG3Q68DQ2 2970 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-202ENST00000244303 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
HIF3A-202ENST00000244303 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
HIF3A-202ENST00000244303 MGPP08493 103 aa10.83□□□□□ -0.68
HIF3A-202ENST00000244303 RNASE3P12724 160 aaKnown RBP10.83□□□□□ -0.68
HIF3A-202ENST00000244303 FLNCQ14315 2725 aa10.83□□□□□ -0.68
HIF3A-202ENST00000244303 ORMDL2Q53FV1 153 aa10.83□□□□□ -0.68
HIF3A-202ENST00000244303 MED14OSP0DP75 135 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 TMEM95Q3KNT9 176 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 C20orf78Q9BR46 151 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 TEX48A0A1B0GUV7 120 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 RNF223E7ERA6 249 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 SLC25A16P16260 332 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 CFHR3Q02985 330 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 CEND1Q8N111 149 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
HIF3A-202ENST00000244303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.82□□□□□ -0.68
HIF3A-202ENST00000244303 COX6B1P14854 86 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 PLNP26678 52 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 TRAV12-1A0A0B4J245 112 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 K7EMI3 77 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 GATA3P23771 443 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
HIF3A-202ENST00000244303 F8VRH5 84 aa10.8□□□□□ -0.68
HIF3A-202ENST00000244303 H7C1H1 209 aa10.8□□□□□ -0.68
HIF3A-202ENST00000244303 SAMD13Q5VXD3 122 aa10.8□□□□□ -0.68
HIF3A-202ENST00000244303 AGRNO00468 2067 aa10.8□□□□□ -0.68
HIF3A-202ENST00000244303 ZNF843Q8N446 348 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 LINC01356Q8N9X3 169 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 KLLNB2CW77 178 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 DCANP1Q8TF63 244 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 CHTOPQ9Y3Y2 248 aaKnown RBP10.79□□□□□ -0.68
HIF3A-202ENST00000244303 USP24Q9UPU5 2620 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 CSPG4Q6UVK1 2322 aa10.79□□□□□ -0.68
HIF3A-202ENST00000244303 A0A096LNT2 108 aa10.78□□□□□ -0.68
HIF3A-202ENST00000244303 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
HIF3A-202ENST00000244303 NEXN-AS1Q8NBZ9 246 aa10.78□□□□□ -0.68
HIF3A-202ENST00000244303 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
HIF3A-202ENST00000244303 K7EMT4 169 aa10.78□□□□□ -0.68
HIF3A-202ENST00000244303 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-202ENST00000244303 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
HIF3A-202ENST00000244303 NXPH4O95158 308 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 ID1P41134 155 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 C10orf99Q6UWK7 81 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 MYO18BQ8IUG5 2567 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 IGLL5B9A064 214 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 PSMB8P28062 276 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 KIF25-AS1Q9Y6Z4 181 aa10.77□□□□□ -0.69
HIF3A-202ENST00000244303 IGHV4-59P01825 116 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 LINC00315P59091 139 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 DEFB112Q30KQ8 113 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 MAPK1IP1LQ8NDC0 245 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 JPT2Q9H910 190 aa10.76□□□□□ -0.69
HIF3A-202ENST00000244303 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 E9PLD3 99 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 F8W1H4 67 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 J3QR89 54 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 PPP1R17O96001 155 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 H3BMG7 143 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 TGFAP01135 160 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 AZU1P20160 251 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 WFDC2Q14508 124 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 ZFYVE26Q68DK2 2539 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
HIF3A-202ENST00000244303 CD7P09564 240 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 TAL2Q16559 108 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
HIF3A-202ENST00000244303 J3QLI3 93 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms