RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 F5H697 171 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 SMPXQ9UHP9 88 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 FLNAP21333 2647 aaKnown RBP9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 MXRA5Q9NR99 2828 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 K7ERJ3 54 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
SEC61A1-201ENST00000243253 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 H3BUX3 64 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 SMIM17P0DL12 118 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 EDN2P20800 178 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 Q6ZS46 218 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 FOXC2Q99958 501 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 MRPL35Q9NZE8 188 aaKnown RBP9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
SEC61A1-201ENST00000243253 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.96
SEC61A1-201ENST00000243253 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.96
SEC61A1-201ENST00000243253 GTSCR1Q86UQ5 136 aa9.09□□□□□ -0.96
SEC61A1-201ENST00000243253 TRBV7-3A0A075B6L6 115 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 A0A087WX48 190 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 LINC01619G3V211 115 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 SOCS3O14543 225 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 ATP5LO75964 103 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 RNASE4P34096 147 aaKnown RBP9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 PRO0461Q9UI25 63 aa9.08□□□□□ -0.96
SEC61A1-201ENST00000243253 DPM2O94777 84 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 EFNA4P52798 201 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 C10orf99Q6UWK7 81 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 METTL26Q96S19 204 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 UNQ9165/PRO28630Q6UXU0 137 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 TRAV12-1A0A0B4J245 112 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 RAB9AP51151 201 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 LAGE3Q14657 143 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 SVIPQ8NHG7 77 aa9.07□□□□□ -0.96
SEC61A1-201ENST00000243253 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 NHP2Q9NX24 153 aaKnown RBP9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 MUC4Q99102 2169 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 H7C2G1 150 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 ATP5G2Q06055 141 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 RASL10AQ92737 203 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
SEC61A1-201ENST00000243253 IGLL5B9A064 214 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 CRIP2P52943 208 aaPredicted RBP9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 TAL2Q16559 108 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 ZFAND2AQ8N6M9 145 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 NPFFO15130 113 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 ITPR3Q14573 2671 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 UBE2E1P51965 193 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 SCGB1D4Q6XE38 83 aa9.05□□□□□ -0.96
SEC61A1-201ENST00000243253 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 COX6B1P14854 86 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 IGHV3-73A0A0B4J1V6 119 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 FABP2P12104 132 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 CCL19Q99731 98 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 SPANXB1Q9NS25 103 aaPredicted RBP9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 A0A087WWL8 130 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
SEC61A1-201ENST00000243253 MORN3Q6PF18 240 aaPredicted RBP9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 MRAP2Q96G30 205 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 TRBV7-1A0A0A6YYK4 115 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 TRAV41A0A0B4J266 112 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 CRYGDP07320 174 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 LINC00315P59091 139 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 ATP6V0BQ99437 205 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 SMIM2Q9BVW6 85 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 AKAP9Q99996 3911 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
SEC61A1-201ENST00000243253 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 GNRH2O43555 120 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 PRM2P04554 102 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 PLNP26678 52 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 EEF1AKMT3Q96AZ1 226 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 PHLDA3Q9Y5J5 127 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 KIF25-AS1Q9Y6Z4 181 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 IGHV4-30-2A0A087WSY4 118 aa9.02□□□□□ -0.97
SEC61A1-201ENST00000243253 F8VRH5 84 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms