RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GCN1Q92616 2671 aaKnown RBP17.29■□□□□ 0.36
MSX2-201ENST00000239243 NXPH4O95158 308 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 CTAG1AP78358 180 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 DEFB114Q30KQ6 69 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 SPATA45Q537H7 98 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 DEFB125Q8N687 156 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 CCL24O00175 119 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 CD7P09564 240 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 DEFB131AP59861 70 aa17.29■□□□□ 0.36
MSX2-201ENST00000239243 PRSS47A8MTI9 375 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 SPINK13Q1W4C9 94 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 A0A096LNJ9 63 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 OR4C46A6NHA9 309 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 GAS8-AS1O95177 125 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 HLA-DRB4P13762 266 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 AMTNQ6UX39 209 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 ZNF705AQ6ZN79 300 aaPredicted RBP17.28■□□□□ 0.36
MSX2-201ENST00000239243 C11orf44Q8N8P7 122 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 SPAG8Q99932 426 aaPredicted RBP17.28■□□□□ 0.36
MSX2-201ENST00000239243 MIEN1Q9BRT3 115 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 HLA-DRB4X5D2U9 266 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 ACANP16112 2415 aa17.28■□□□□ 0.36
MSX2-201ENST00000239243 TRAV25A0A0B4J276 109 aa17.27■□□□□ 0.36
MSX2-201ENST00000239243 SPATA12Q7Z6I5 190 aa17.27■□□□□ 0.36
MSX2-201ENST00000239243 TRAV12-2A0A075B6T6 113 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 TRAV9-2A0A087WT02 112 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 A0A1W2PRX2 142 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 A8MTW9 85 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 NDUFA7O95182 113 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 Q8N8P6 123 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 NRACQ8N912 160 aa17.27■□□□□ 0.35
MSX2-201ENST00000239243 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.35
MSX2-201ENST00000239243 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
MSX2-201ENST00000239243 ATOH7Q8N100 152 aa17.25■□□□□ 0.35
MSX2-201ENST00000239243 FASNP49327 2511 aaKnown RBP17.25■□□□□ 0.35
MSX2-201ENST00000239243 IGHV1OR15-1A0A075B7D0 117 aa17.25■□□□□ 0.35
MSX2-201ENST00000239243 AKAP9Q99996 3911 aa17.25■□□□□ 0.35
MSX2-201ENST00000239243 TRAV26-2A0A0B4J265 109 aa17.24■□□□□ 0.35
MSX2-201ENST00000239243 CD300EQ496F6 205 aaPredicted RBP17.24■□□□□ 0.35
MSX2-201ENST00000239243 C14orf178Q8N769 122 aaPredicted RBP17.24■□□□□ 0.35
MSX2-201ENST00000239243 H3BMM0 161 aa17.24■□□□□ 0.35
MSX2-201ENST00000239243 HIST2H2BDQ6DRA6 164 aa17.24■□□□□ 0.35
MSX2-201ENST00000239243 SMR3AQ99954 134 aa17.24■□□□□ 0.35
MSX2-201ENST00000239243 MAP6D1Q9H9H5 199 aa17.24■□□□□ 0.35
MSX2-201ENST00000239243 KNCNA6PVL3 124 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 LINC01545Q5VT33 79 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 IGHV3-16A0A0C4DH30 117 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 LY6G6DO95868 133 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 PPP1R17O96001 155 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 SMIM17P0DL12 118 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 C9orf85Q96MD7 179 aa17.23■□□□□ 0.35
MSX2-201ENST00000239243 SPRY2O43597 315 aa17.22■□□□□ 0.35
MSX2-201ENST00000239243 FCER1GP30273 86 aa17.22■□□□□ 0.35
MSX2-201ENST00000239243 IGLV2-18A0A075B6J9 118 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 SYT8Q8NBV8 401 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 ANK3Q12955 4377 aaKnown RBP17.21■□□□□ 0.35
MSX2-201ENST00000239243 TRGV11A0A075B6L2 103 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 Q8N1Y9 231 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 POM121L12Q8N7R1 296 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 C20orf78Q9BR46 151 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 UQCR10Q9UDW1 63 aa17.21■□□□□ 0.35
MSX2-201ENST00000239243 H0Y8G0 127 aa17.2■□□□□ 0.34
MSX2-201ENST00000239243 MGPP08493 103 aa17.2■□□□□ 0.34
MSX2-201ENST00000239243 ZNF256Q9Y2P7 627 aaPredicted RBP17.2■□□□□ 0.34
MSX2-201ENST00000239243 IGLC3P0DOY3 106 aa17.19■□□□□ 0.34
MSX2-201ENST00000239243 LBHQ53QV2 105 aaPredicted RBP17.19■□□□□ 0.34
MSX2-201ENST00000239243 HSBP1L1C9JCN9 74 aa17.19■□□□□ 0.34
MSX2-201ENST00000239243 IFI27L1Q96BM0 104 aa17.19■□□□□ 0.34
MSX2-201ENST00000239243 AGRNO00468 2067 aa17.18■□□□□ 0.34
MSX2-201ENST00000239243 LAGE3Q14657 143 aa17.18■□□□□ 0.34
MSX2-201ENST00000239243 SMIM2Q9BVW6 85 aa17.18■□□□□ 0.34
MSX2-201ENST00000239243 KIF25-AS1Q9Y6Z4 181 aa17.18■□□□□ 0.34
MSX2-201ENST00000239243 FXYD7P58549 80 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 SUMO2P61956 95 aaKnown RBP17.17■□□□□ 0.34
MSX2-201ENST00000239243 MAJINQ3KP22 176 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 MRPL52Q86TS9 123 aaKnown RBP17.17■□□□□ 0.34
MSX2-201ENST00000239243 RASL10AQ92737 203 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 HIVEP2P31629 2446 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 K7EMI3 77 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 IGLL1P15814 213 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 PROK1P58294 105 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 CLUHP3Q96NS8 147 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 ST20Q9HBF5 79 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 MDFICQ9P1T7 246 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 HECTD1Q9ULT8 2610 aa17.17■□□□□ 0.34
MSX2-201ENST00000239243 LGALS9BQ3B8N2 356 aa17.16■□□□□ 0.34
MSX2-201ENST00000239243 LGALS9CQ6DKI2 356 aa17.16■□□□□ 0.34
MSX2-201ENST00000239243 MUC4Q99102 2169 aa17.16■□□□□ 0.34
MSX2-201ENST00000239243 CBY3A6NI87 242 aa17.15■□□□□ 0.34
MSX2-201ENST00000239243 MTORP42345 2549 aa17.15■□□□□ 0.34
MSX2-201ENST00000239243 ZNF124Q15973 351 aa17.15■□□□□ 0.34
MSX2-201ENST00000239243 TMEM158Q8WZ71 300 aa17.15■□□□□ 0.34
MSX2-201ENST00000239243 SORL1Q92673 2214 aa17.14■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1BA6NDE4 496 aaKnown RBP17.14■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1EA6NEQ0 496 aaKnown RBP17.14■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1DP0C7P1 496 aaKnown RBP17.14■□□□□ 0.33
MSX2-201ENST00000239243 LINC00315P59091 139 aa17.14■□□□□ 0.33
MSX2-201ENST00000239243 M0R143 59 aa17.13■□□□□ 0.33
MSX2-201ENST00000239243 ORMDL2Q53FV1 153 aa17.13■□□□□ 0.33
MSX2-201ENST00000239243 CMC4P56277 68 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms