RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 EIF5A2Q9GZV4 153 aaKnown RBP7.96□□□□□ -1.14
SF3B6-201ENST00000233468 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 CIDEAO60543 219 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 TMEM88Q6PEY1 159 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 PTH2Q96A98 100 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 MLST8Q9BVC4 326 aa7.95□□□□□ -1.14
SF3B6-201ENST00000233468 MRPL16Q9NX20 251 aaKnown RBP7.95□□□□□ -1.14
SF3B6-201ENST00000233468 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 H3BNG1 76 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 CRIP1P50238 77 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 RAB14P61106 215 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 PIK3CD-AS1Q5SR53 167 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 NHLRC2Q8NBF2 726 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
SF3B6-201ENST00000233468 TRAV4A0A0B4J268 109 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 TRGV4A0A0C4DH28 118 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 XKRY2A2RUG3 117 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 M0R036 132 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
SF3B6-201ENST00000233468 ZNF876PQ49A33 203 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 TOR2AQ5JU69 321 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 DNLZQ5SXM8 178 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 PRR27Q6MZM9 219 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 OR4C5Q8NGB2 326 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 C9orf85Q96MD7 179 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 FAM210AQ96ND0 272 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 IL36BQ9NZH7 164 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 PRO0255Q9UI72 69 aa7.93□□□□□ -1.14
SF3B6-201ENST00000233468 DNAH10Q8IVF4 4471 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 TRAV26-1A0A087WT03 109 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 C9JCJ5 164 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 NUDT3O95989 172 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 CXCL1P09341 107 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 RPS20P60866 119 aaKnown RBP7.92□□□□□ -1.14
SF3B6-201ENST00000233468 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 DERL1Q9BUN8 251 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
SF3B6-201ENST00000233468 HERC2O95714 4834 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 RAB19A4D1S5 217 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 A8MWV9 139 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 ARMS2P0C7Q2 107 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 MED14OSP0DP75 135 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
SF3B6-201ENST00000233468 FAM3BP58499 235 aaPredicted RBP7.91□□□□□ -1.14
SF3B6-201ENST00000233468 RNF212Q495C1 297 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
SF3B6-201ENST00000233468 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 GRIFINA4D1Z8 144 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 H3BVH4 76 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 P01737 135 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 HOXA5P20719 270 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 CEBPGP53567 150 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 CCL18P55774 89 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 PEA15Q15121 130 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 ZFP82Q8N141 532 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 PCNPQ8WW12 178 aaKnown RBP7.9□□□□□ -1.14
SF3B6-201ENST00000233468 PARLQ9H300 379 aa7.9□□□□□ -1.14
SF3B6-201ENST00000233468 A0A0J9YY99 117 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 RS1O15537 224 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 FHL2Q14192 279 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 FAM74A3Q4VXF1 159 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 ZNF479Q96JC4 524 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 ICOSQ9Y6W8 199 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
SF3B6-201ENST00000233468 VPS13DQ5THJ4 4388 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 RHODO00212 210 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 IGLV2-8P01709 118 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 CRYBA4P53673 196 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
SF3B6-201ENST00000233468 CFAP126Q5VTH2 177 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 SH2D6Q7Z4S9 175 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 OR2D3Q8NGH3 330 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 SCRT2Q9NQ03 307 aa7.88□□□□□ -1.15
SF3B6-201ENST00000233468 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 OR5AL1P0C617 328 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 SFTA3P0C7M3 94 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 SPANXN1Q5VSR9 72 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 OCC1Q8TAD7 63 aa7.87□□□□□ -1.15
SF3B6-201ENST00000233468 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 F2Z2F3 143 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 M0R381 172 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 SNAI2O43623 268 aa7.86□□□□□ -1.15
SF3B6-201ENST00000233468 SRP19P09132 144 aaKnown RBP7.86□□□□□ -1.15
SF3B6-201ENST00000233468 SRIP30626 198 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms