RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.75
NEK4-201ENST00000233027 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 EML6Q6ZMW3 1958 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 DAND5Q8N907 189 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 NUP210Q8TEM1 1887 aaPredicted RBP10.39□□□□□ -0.75
NEK4-201ENST00000233027 AJUBAQ96IF1 538 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 E7EUB6 86 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 CTSGP08311 255 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 ORMDL1Q9P0S3 153 aa10.39□□□□□ -0.75
NEK4-201ENST00000233027 A0A0J9YXV3 536 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 CGB3P0DN86 165 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 DOCK10Q96BY6 2186 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 NCKAP5O14513 1909 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 KIF26AQ9ULI4 1882 aaPredicted RBP10.38□□□□□ -0.75
NEK4-201ENST00000233027 Q6ZSR3 168 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 ROS1P08922 2347 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 DEFB1P60022 68 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 BLCAPP62952 87 aa10.38□□□□□ -0.75
NEK4-201ENST00000233027 IGKV2D-24A0A075B6R9 120 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 A4D1N5 150 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 PKDREJQ9NTG1 2253 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
NEK4-201ENST00000233027 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 CCL24O00175 119 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 WFDC2Q14508 124 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 MRPL36Q9P0J6 103 aaKnown RBP10.37□□□□□ -0.75
NEK4-201ENST00000233027 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
NEK4-201ENST00000233027 RNF138Q8WVD3 245 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 USF3Q68DE3 2245 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 IGHV4-61A0A0C4DH41 118 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 COL6A6A6NMZ7 2263 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 C16orf54Q6UWD8 224 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 DKK4Q9UBT3 224 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 CADP27708 2225 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 TAX1BP3O14907 124 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 WI2-2373I1.2A0A1W2PRP0 233 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 K7EQD1 137 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 Q9HAA7 133 aa10.36□□□□□ -0.75
NEK4-201ENST00000233027 PRSS47A8MTI9 375 aa10.35□□□□□ -0.75
NEK4-201ENST00000233027 BUB3O43684 328 aa10.35□□□□□ -0.75
NEK4-201ENST00000233027 PIP4P1Q86T03 277 aa10.35□□□□□ -0.75
NEK4-201ENST00000233027 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
NEK4-201ENST00000233027 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
NEK4-201ENST00000233027 EP300Q09472 2414 aaPredicted RBP10.34□□□□□ -0.75
NEK4-201ENST00000233027 IGHV4-30-2A0A087WSY4 118 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 HERV-K104P63124 156 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 Q8N9W7 124 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 CNOT1A5YKK6 2376 aaKnown RBP10.34□□□□□ -0.75
NEK4-201ENST00000233027 IGKV3D-7A0A0C4DH55 119 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 NBL1P41271 181 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
NEK4-201ENST00000233027 Q8N1Y9 231 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 ESM1Q9NQ30 184 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
NEK4-201ENST00000233027 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 NDUFS5O43920 106 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 GYPEP15421 78 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 RBM3P98179 157 aaKnown RBP10.33□□□□□ -0.76
NEK4-201ENST00000233027 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 C5orf56Q8N8D9 126 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 CGB7P0DN87 165 aa10.33□□□□□ -0.76
NEK4-201ENST00000233027 IGHV4OR15-8A0A075B7B6 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 A0A087WW49 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 OBSL1O75147 1896 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
NEK4-201ENST00000233027 NCR3O14931 201 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 IGHV3-30-3P0DP02 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 SPTBN2O15020 2390 aa10.32□□□□□ -0.76
NEK4-201ENST00000233027 NRGNQ92686 78 aa10.31□□□□□ -0.76
NEK4-201ENST00000233027 C11orf1Q9H5F2 150 aa10.31□□□□□ -0.76
NEK4-201ENST00000233027 HIST2H2BCQ6DN03 193 aa10.31□□□□□ -0.76
NEK4-201ENST00000233027 IGFL2Q6UWQ7 119 aa10.31□□□□□ -0.76
NEK4-201ENST00000233027 UBE2BP63146 152 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 RMI2Q96E14 147 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 NCOR1O75376 2440 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 WISP2O76076 250 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
NEK4-201ENST00000233027 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
NEK4-201ENST00000233027 Q8N7P7 452 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
NEK4-201ENST00000233027 ARHGAP21Q5T5U3 1957 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 LOXL1Q08397 574 aaPredicted RBP10.29□□□□□ -0.76
NEK4-201ENST00000233027 SEM1Q6ZVN7 128 aa10.29□□□□□ -0.76
NEK4-201ENST00000233027 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms