RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 AGRNO00468 2067 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 IGLV2-11P01706 119 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 HBDP02042 147 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 RPS20P60866 119 aaKnown RBP8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 MRPL51Q4U2R6 128 aaKnown RBP8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 BOD1L2Q8IYS8 172 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 OTORQ9NRC9 128 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 ZNF492Q9P255 531 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 K7EQM0 130 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 LEPP41159 167 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 F8W735 103 aaPredicted RBP8.96□□□□□ -0.97
TNFAIP1-201ENST00000226225 SYNJ2BPP57105 145 aa8.96□□□□□ -0.97
TNFAIP1-201ENST00000226225 UNQ9165/PRO28630Q6UXU0 137 aa8.96□□□□□ -0.97
TNFAIP1-201ENST00000226225 HLA-DMBP28068 263 aa8.96□□□□□ -0.98
TNFAIP1-201ENST00000226225 CT83Q5H943 113 aa8.96□□□□□ -0.98
TNFAIP1-201ENST00000226225 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZNF702PQ9H963 129 aa8.96□□□□□ -0.98
TNFAIP1-201ENST00000226225 KLHL30-AS1Q8NEE0 82 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 ESM1Q9NQ30 184 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 FSHBP01225 129 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 SIGMAR1Q99720 223 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 NPIPB6E9PJ23 425 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 INSL3P51460 131 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 C9orf139Q6ZV77 190 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 CHAC1Q9BUX1 264 aa8.95□□□□□ -0.98
TNFAIP1-201ENST00000226225 SH2D1AO60880 128 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 Q6ZSV7 163 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 C16orf92Q96LL3 132 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 SPRY2O43597 315 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 NEGR1Q7Z3B1 354 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 H3BRN7 92 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 IGHG4P01861 327 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZFHX3Q15911 3703 aa8.94□□□□□ -0.98
TNFAIP1-201ENST00000226225 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 NSUN5P1Q3KNT7 163 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 UFC1Q9Y3C8 167 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 TRAV26-2A0A0B4J265 109 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 OR11H1Q8NG94 326 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 OR9G4Q8NGQ1 327 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 WI2-2373I1.2A0A1W2PRP0 233 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 C18orf65Q6ZTR6 163 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 RHPN1-AS1Q9BWJ2 59 aa8.93□□□□□ -0.98
TNFAIP1-201ENST00000226225 ELANEP08246 267 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 HIST1H4GQ99525 98 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZNF469Q96JG9 3925 aaPredicted RBP8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 GAGE12HA6NDE8 117 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 H3BUA1 57 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 PSMB8P28062 276 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
TNFAIP1-201ENST00000226225 ERCC8Q13216 396 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 TMEM158Q8WZ71 300 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZNF479Q96JC4 524 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 DAZ1Q9NQZ3 744 aaKnown RBP8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 TRBV25-1A0A075B6N4 114 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 VGLL1Q99990 258 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 IGHV4OR15-8A0A075B7B6 117 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 A0A087WW49 117 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 SLURP1P55000 103 aa8.91□□□□□ -0.98
TNFAIP1-201ENST00000226225 MAST4O15021 2626 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 OTOGQ6ZRI0 2925 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 NDUFA4O00483 81 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 BUB3O43684 328 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 HOXD3P31249 432 aaPredicted RBP8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 MAP1LC3AQ9H492 121 aa8.9□□□□□ -0.98
TNFAIP1-201ENST00000226225 IGKV3-20P01619 116 aa8.9□□□□□ -0.99
TNFAIP1-201ENST00000226225 IGKCP01834 107 aa8.9□□□□□ -0.99
TNFAIP1-201ENST00000226225 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.99
TNFAIP1-201ENST00000226225 DYNLRB2Q8TF09 96 aa8.9□□□□□ -0.99
TNFAIP1-201ENST00000226225 TMEM86BQ8N661 226 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 GLMPQ8WWB7 406 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 ZFAND3Q9H8U3 227 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 MRPL35Q9NZE8 188 aaKnown RBP8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 EDN2P20800 178 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 SPAG8Q99932 426 aaPredicted RBP8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
TNFAIP1-201ENST00000226225 LGALS1P09382 135 aaKnown RBP8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 CKS1BP61024 79 aa8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 CD28P10747 220 aa8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 PRSS47A8MTI9 375 aa8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 CRIP2P52943 208 aaPredicted RBP8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 CHTOPQ9Y3Y2 248 aaKnown RBP8.88□□□□□ -0.99
TNFAIP1-201ENST00000226225 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
TNFAIP1-201ENST00000226225 BMI1P35226 326 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms