RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 SOHLH1Q5JUK2 328 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 LINC01551Q86U37 167 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 RASL10AQ92737 203 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 KLK5Q9Y337 293 aaPredicted RBP13.96□□□□□ -0.17
HOXA6-201ENST00000222728 LY96Q9Y6Y9 160 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 TMEM241Q24JQ0 296 aa13.95□□□□□ -0.18
HOXA6-201ENST00000222728 SFTA3P0C7M3 94 aa13.94□□□□□ -0.18
HOXA6-201ENST00000222728 HOXA5P20719 270 aa13.94□□□□□ -0.18
HOXA6-201ENST00000222728 MUC21A0A0G2JKD1 596 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 MUC21A0A140T8X8 626 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 RPL23P62829 140 aaKnown RBP13.93□□□□□ -0.18
HOXA6-201ENST00000222728 COMMD7Q86VX2 200 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 POM121L12Q8N7R1 296 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 C18orf15Q96N68 181 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 NAT8Q9UHE5 227 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 PHLDA3Q9Y5J5 127 aa13.93□□□□□ -0.18
HOXA6-201ENST00000222728 IGHV4-4A0A075B6R2 117 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 CXCL1P09341 107 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 RPS20P60866 119 aaKnown RBP13.92□□□□□ -0.18
HOXA6-201ENST00000222728 ADIRFQ15847 76 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 TMEM88Q6PEY1 159 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 ZNF479Q96JC4 524 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 TPPP3Q9BW30 176 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
HOXA6-201ENST00000222728 SCRT2Q9NQ03 307 aa13.92□□□□□ -0.18
HOXA6-201ENST00000222728 M0R381 172 aa13.91□□□□□ -0.18
HOXA6-201ENST00000222728 GATCO43716 136 aaKnown RBP13.91□□□□□ -0.18
HOXA6-201ENST00000222728 ERVFC1-1P60608 527 aa13.91□□□□□ -0.18
HOXA6-201ENST00000222728 SSTP61278 116 aa13.91□□□□□ -0.18
HOXA6-201ENST00000222728 OR10AG1Q8NH19 301 aa13.91□□□□□ -0.18
HOXA6-201ENST00000222728 JPT2Q9H910 190 aa13.91□□□□□ -0.18
HOXA6-201ENST00000222728 TRAV4A0A0B4J268 109 aa13.9□□□□□ -0.18
HOXA6-201ENST00000222728 MED14OSP0DP75 135 aa13.9□□□□□ -0.18
HOXA6-201ENST00000222728 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
HOXA6-201ENST00000222728 OR4C5Q8NGB2 326 aa13.9□□□□□ -0.18
HOXA6-201ENST00000222728 PTH2Q96A98 100 aa13.9□□□□□ -0.18
HOXA6-201ENST00000222728 A0A0J9YY99 117 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 XKRY2A2RUG3 117 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 RS1O15537 224 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 SNAI2O43623 268 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 FER1L6-AS1Q8NA97 138 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 SYT8Q8NBV8 401 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 ISOC2Q96AB3 205 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 APLNQ9ULZ1 77 aa13.89□□□□□ -0.19
HOXA6-201ENST00000222728 TRAV26-1A0A087WT03 109 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 IGHV3-73A0A0B4J1V6 119 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 IGLC6P0CF74 106 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 FHL2Q14192 279 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 CFAP126Q5VTH2 177 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 UQCC3Q6UW78 93 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 SSBP4Q9BWG4 385 aaPredicted RBP13.88□□□□□ -0.19
HOXA6-201ENST00000222728 ALMS1Q8TCU4 4167 aa13.88□□□□□ -0.19
HOXA6-201ENST00000222728 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
HOXA6-201ENST00000222728 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
HOXA6-201ENST00000222728 ZFP82Q8N141 532 aa13.87□□□□□ -0.19
HOXA6-201ENST00000222728 NDUFAF3Q9BU61 184 aa13.87□□□□□ -0.19
HOXA6-201ENST00000222728 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
HOXA6-201ENST00000222728 SPANXN1Q5VSR9 72 aa13.86□□□□□ -0.19
HOXA6-201ENST00000222728 SFRP2Q96HF1 295 aa13.86□□□□□ -0.19
HOXA6-201ENST00000222728 FAM210BQ96KR6 192 aa13.86□□□□□ -0.19
HOXA6-201ENST00000222728 SAMD10Q9BYL1 202 aa13.86□□□□□ -0.19
HOXA6-201ENST00000222728 LYSTQ99698 3801 aa13.85□□□□□ -0.19
HOXA6-201ENST00000222728 LYZL1Q6UWQ5 148 aa13.85□□□□□ -0.19
HOXA6-201ENST00000222728 GTSF1Q8WW33 167 aa13.85□□□□□ -0.19
HOXA6-201ENST00000222728 VSIG2Q96IQ7 327 aa13.85□□□□□ -0.19
HOXA6-201ENST00000222728 A0A087WWL8 130 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 A8MWV9 139 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 NXPH4O95158 308 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 NUDT3O95989 172 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 ADCYAP1P18509 176 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 C15orf54Q8N8G6 183 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 HHLA3Q9XRX5 114 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 V9GYV3 84 aa13.84□□□□□ -0.19
HOXA6-201ENST00000222728 TMEM218A2RU14 115 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 A8MWL6 223 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 PAX4O43316 350 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 CRYBA4P53673 196 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 FAM74A4Q5TZK3 123 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 MSRB1Q9NZV6 116 aa13.83□□□□□ -0.2
HOXA6-201ENST00000222728 DNAH1Q9P2D7 4330 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 CTRLP40313 264 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 TCTAP57738 103 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 CT83Q5H943 113 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 PRO0255Q9UI72 69 aa13.82□□□□□ -0.2
HOXA6-201ENST00000222728 F2Z2F3 143 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 F8W036 122 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 CRYGDP07320 174 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 GATA1P15976 413 aaPredicted RBP13.81□□□□□ -0.2
HOXA6-201ENST00000222728 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 Q6ZSN1 163 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 C15orf53Q8NAA6 179 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
HOXA6-201ENST00000222728 CACNG7P62955 275 aa13.8□□□□□ -0.2
HOXA6-201ENST00000222728 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
HOXA6-201ENST00000222728 LOC100131303A0A0U1RQF7 123 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms