RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 KNCNA6PVL3 124 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 FOSL1P15407 271 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 PROK1P58294 105 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
VRK1-201ENST00000216639 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 A8MTW9 85 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 H3BMM0 161 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
VRK1-201ENST00000216639 AKAP9Q99996 3911 aa12.9□□□□□ -0.34
VRK1-201ENST00000216639 C20orf202A1L168 122 aa12.9□□□□□ -0.34
VRK1-201ENST00000216639 NXPH4O95158 308 aa12.9□□□□□ -0.34
VRK1-201ENST00000216639 DDTP30046 118 aa12.9□□□□□ -0.34
VRK1-201ENST00000216639 INAFM1C9JVW0 142 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
VRK1-201ENST00000216639 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 CRXO43186 299 aaPredicted RBP12.88□□□□□ -0.35
VRK1-201ENST00000216639 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
VRK1-201ENST00000216639 C14orf178Q8N769 122 aaPredicted RBP12.88□□□□□ -0.35
VRK1-201ENST00000216639 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 PRSS47A8MTI9 375 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 HBDP02042 147 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 PET117Q6UWS5 81 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 SYT8Q8NBV8 401 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
VRK1-201ENST00000216639 SPRY2O43597 315 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
VRK1-201ENST00000216639 CMC4P56277 68 aaPredicted RBP12.86□□□□□ -0.35
VRK1-201ENST00000216639 Q8N1Y9 231 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 Q8N8P6 123 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 NRACQ8N912 160 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
VRK1-201ENST00000216639 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 PPP1R17O96001 155 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 MGPP08493 103 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 FXYD7P58549 80 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 DEFA6Q01524 100 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 LINC00173Q6ZV60 143 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 ZNF747Q9BV97 191 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 ACANP16112 2415 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 SAP30O75446 220 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 ZNF124Q15973 351 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
VRK1-201ENST00000216639 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
VRK1-201ENST00000216639 CBY3A6NI87 242 aa12.84□□□□□ -0.35
VRK1-201ENST00000216639 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
VRK1-201ENST00000216639 OR11H12B2RN74 326 aa12.84□□□□□ -0.35
VRK1-201ENST00000216639 ANK3Q12955 4377 aaKnown RBP12.84□□□□□ -0.35
VRK1-201ENST00000216639 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
VRK1-201ENST00000216639 MDFICQ9P1T7 246 aa12.83□□□□□ -0.36
VRK1-201ENST00000216639 HECTD1Q9ULT8 2610 aa12.83□□□□□ -0.36
VRK1-201ENST00000216639 A0A096LNJ9 63 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
VRK1-201ENST00000216639 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 ZNF705AQ6ZN79 300 aaPredicted RBP12.82□□□□□ -0.36
VRK1-201ENST00000216639 STHQ8IWL8 128 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 FCER1GP30273 86 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 SPATA12Q7Z6I5 190 aa12.82□□□□□ -0.36
VRK1-201ENST00000216639 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
VRK1-201ENST00000216639 INSP01308 110 aa12.81□□□□□ -0.36
VRK1-201ENST00000216639 ATOH7Q8N100 152 aa12.81□□□□□ -0.36
VRK1-201ENST00000216639 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
VRK1-201ENST00000216639 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
VRK1-201ENST00000216639 IGLV2-18A0A075B6J9 118 aa12.8□□□□□ -0.36
VRK1-201ENST00000216639 H0Y8G0 127 aa12.8□□□□□ -0.36
VRK1-201ENST00000216639 SUMO2P61956 95 aaKnown RBP12.8□□□□□ -0.36
VRK1-201ENST00000216639 RASL10AQ92737 203 aa12.8□□□□□ -0.36
VRK1-201ENST00000216639 SMIM2Q9BVW6 85 aa12.8□□□□□ -0.36
VRK1-201ENST00000216639 CRLF1O75462 422 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1A1P0DJD3 496 aaKnown RBP12.79□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1CP0DJD4 496 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 LAGE3Q14657 143 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 RBMY1FQ15415 496 aaKnown RBP12.79□□□□□ -0.36
VRK1-201ENST00000216639 AGRNO00468 2067 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 K7EMI3 77 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 PF4P02776 101 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
VRK1-201ENST00000216639 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 IFI27L1Q96BM0 104 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
VRK1-201ENST00000216639 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms