RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 TEX15Q9BXT5 2789 aa13.5□□□□□ -0.25
SLC22A4-201ENST00000200652 RASL10AQ92737 203 aa13.5□□□□□ -0.25
SLC22A4-201ENST00000200652 ODF3Q96PU9 254 aa13.5□□□□□ -0.25
SLC22A4-201ENST00000200652 MUC4Q99102 2169 aa13.5□□□□□ -0.25
SLC22A4-201ENST00000200652 C7orf71A4D174 169 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 NXPH4O95158 308 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 OR1N2Q8NGR9 330 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 ADAMTSL5Q6ZMM2 481 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 SMIM2Q9BVW6 85 aa13.49□□□□□ -0.25
SLC22A4-201ENST00000200652 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 PRSS1P07477 247 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 MGPP08493 103 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 ODF1Q14990 250 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 DEFB136Q30KP8 78 aa13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 RPL39LQ96EH5 51 aaKnown RBP13.48□□□□□ -0.25
SLC22A4-201ENST00000200652 DLEU1O43261 78 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 NUDT3O95989 172 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 FGF6P10767 208 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 FOSL1P15407 271 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 SLURP1P55000 103 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 SUMO2P61956 95 aaKnown RBP13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 CREBBPQ92793 2442 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 APCP25054 2843 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 CD7P09564 240 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 C2orf91Q6ZV80 131 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 C20orf78Q9BR46 151 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 ZMAT4Q9H898 229 aa13.47□□□□□ -0.25
SLC22A4-201ENST00000200652 TRAV12-2A0A075B6T6 113 aa13.46□□□□□ -0.25
SLC22A4-201ENST00000200652 ATP5LO75964 103 aa13.46□□□□□ -0.25
SLC22A4-201ENST00000200652 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
SLC22A4-201ENST00000200652 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.25
SLC22A4-201ENST00000200652 FOXC2Q99958 501 aa13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 AGRNO00468 2067 aa13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 TCTAP57738 103 aa13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 LINC00315P59091 139 aa13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 ZNF469Q96JG9 3925 aaPredicted RBP13.45□□□□□ -0.26
SLC22A4-201ENST00000200652 CDKN1BP46527 198 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 GAGE1Q13065 139 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 HIST2H2BCQ6DN03 193 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 LINC01619G3V211 115 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 SPINK13Q1W4C9 94 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 C12orf54Q6X4T0 127 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 JPT2Q9H910 190 aa13.44□□□□□ -0.26
SLC22A4-201ENST00000200652 FOXI2Q6ZQN5 318 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 Q6ZVH6 145 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 HHLA3Q9XRX5 114 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 TMEM86BQ8N661 226 aa13.43□□□□□ -0.26
SLC22A4-201ENST00000200652 NBPF19A0A087WUL8 3843 aa13.42□□□□□ -0.26
SLC22A4-201ENST00000200652 C4orf3Q8WVX3 66 aa13.42□□□□□ -0.26
SLC22A4-201ENST00000200652 C9orf85Q96MD7 179 aa13.42□□□□□ -0.26
SLC22A4-201ENST00000200652 PPP1R17O96001 155 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 IGKCP01834 107 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 AMTNQ6UX39 209 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 DUX3Q96PT4 197 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 MDFICQ9P1T7 246 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 K7EMI3 77 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 NPSP0C0P6 89 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 Q8N1Y9 231 aa13.41□□□□□ -0.26
SLC22A4-201ENST00000200652 IGHV1OR15-1A0A075B7D0 117 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 COX11Q9Y6N1 276 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 SORL1Q92673 2214 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 DPM2O94777 84 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 NMUP48645 174 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 KHDC1LQ5JSQ8 128 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 Q6ZSV7 163 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 PCP2Q8IVA1 136 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 ORAOV1Q8WV07 137 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 TOMM6Q96B49 74 aa13.4□□□□□ -0.26
SLC22A4-201ENST00000200652 A0A087WWL8 130 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 TEX29Q8N6K0 151 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 MRPL35Q9NZE8 188 aaKnown RBP13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 PEMTQ9UBM1 199 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 HIST2H2BDQ6DRA6 164 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
SLC22A4-201ENST00000200652 ITPR3Q14573 2671 aa13.38□□□□□ -0.27
SLC22A4-201ENST00000200652 A0A087WX48 190 aa13.38□□□□□ -0.27
SLC22A4-201ENST00000200652 KNCNA6PVL3 124 aa13.38□□□□□ -0.27
SLC22A4-201ENST00000200652 DLX4Q92988 240 aaPredicted RBP13.38□□□□□ -0.27
SLC22A4-201ENST00000200652 DNAJC9-AS1A6NH13 148 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 DEFB131AP59861 70 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 TMEM160Q9NX00 188 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 IGKV2D-26A0A0A0MRZ7 120 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 SIVA1O15304 175 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 SCGB3A1Q96QR1 104 aa13.37□□□□□ -0.27
SLC22A4-201ENST00000200652 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms