RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 BTF3P20290 206 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 IFI27P40305 119 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 HIST2H2BDQ6DRA6 164 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 MRAP2Q96G30 205 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 MAP6D1Q9H9H5 199 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 HIVEP2P31629 2446 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 LINC00587B1AMM8 73 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 NCR2O95944 276 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 NOTCH2Q04721 2471 aa10.59□□□□□ -0.71
RTFDC1-201ENST00000023939 KIR2DL5BA0A0G2JN68 375 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 KIR2DL5BA0A0G2JPC4 375 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 KNCNA6PVL3 124 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 PMCHL1Q16048 86 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 SPINK13Q1W4C9 94 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 KIR2DL5AQ8N109 375 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 POM121L12Q8N7R1 296 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 DPH3P1Q9H4G8 78 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 NXT2Q9NPJ8 142 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 M0R381 172 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 NRACQ8N912 160 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 OR2K2Q8NGT1 345 aa10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 TIMM8BQ9Y5J9 83 aaPredicted RBP10.58□□□□□ -0.72
RTFDC1-201ENST00000023939 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 CD7P09564 240 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
RTFDC1-201ENST00000023939 A0A096LNJ9 63 aa10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 NDUFA11Q86Y39 141 aa10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
RTFDC1-201ENST00000023939 SYS1-DBNDD2H3BUS1 97 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 DDTP30046 118 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 Q8N8P6 123 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 VAMP8Q9BV40 100 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 KIF25-AS1Q9Y6Z4 181 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 TRGV11A0A075B6L2 103 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 SPATA12Q7Z6I5 190 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 Q8N1Y9 231 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 LINC00467Q9BRT7 94 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
RTFDC1-201ENST00000023939 HBDP02042 147 aa10.54□□□□□ -0.72
RTFDC1-201ENST00000023939 LINC00315P59091 139 aa10.54□□□□□ -0.72
RTFDC1-201ENST00000023939 LURAP1LQ8IV03 231 aa10.54□□□□□ -0.72
RTFDC1-201ENST00000023939 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
RTFDC1-201ENST00000023939 MTORP42345 2549 aa10.54□□□□□ -0.72
RTFDC1-201ENST00000023939 PPP1R17O96001 155 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 C20orf78Q9BR46 151 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 MDFICQ9P1T7 246 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 C20orf202A1L168 122 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 SPRY2O43597 315 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 CRLF1O75462 422 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 IGLV1-51P01701 117 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 KRTAP10-3P60369 221 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 RBMY1FQ15415 496 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 ZNF124Q15973 351 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
RTFDC1-201ENST00000023939 TRAV26-2A0A0B4J265 109 aa10.52□□□□□ -0.73
RTFDC1-201ENST00000023939 RASL10AQ92737 203 aa10.52□□□□□ -0.73
RTFDC1-201ENST00000023939 AGRNO00468 2067 aa10.51□□□□□ -0.73
RTFDC1-201ENST00000023939 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
RTFDC1-201ENST00000023939 FCER1GP30273 86 aa10.51□□□□□ -0.73
RTFDC1-201ENST00000023939 MUC4Q99102 2169 aa10.51□□□□□ -0.73
RTFDC1-201ENST00000023939 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 K7EMI3 77 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 SAP30O75446 220 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 SMIM17P0DL12 118 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 FXYD7P58549 80 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 PIK3CD-AS1Q5SR53 167 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 PTH2Q96A98 100 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 PAM16Q9Y3D7 125 aa10.5□□□□□ -0.73
RTFDC1-201ENST00000023939 SUMO2P61956 95 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms