RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 AmtnQ9D3J8 213 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Gp2Q9D733 531 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm27027S4R1M6 97 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Rdh16O54909 317 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Arrdc5Q497K5 325 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr1457Q8VFK3 317 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 Hdgfl3Q9JMG7 202 aa13.5□□□□□ -0.25
Shh-201ENSMUST00000002708 A0A286YDM5 308 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Iqcf6G3UWF2 157 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Mbd3l2Q3UXB0 228 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Psg17Q62056 475 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Ndufv3Q8BK30 104 aaKnown RBP13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 AtrxQ61687 2476 aaKnown RBP13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 P01915 264 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Wt1P22561 449 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 EpopQ7TNS8 369 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Cdcp2Q8BQH6 427 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm10309Q8C648 119 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Smg1Q8BKX6 3658 aaKnown RBP13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Efnb3O35393 340 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Mef2bO55087 349 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Edn1P22387 202 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Rplp1P47955 114 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Megf10Q6DIB5 1147 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr25Q7TRD6 313 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Hapln4Q80WM4 400 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Ss18l1Q8BW22 402 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Kcnk5Q9JK62 502 aa13.49□□□□□ -0.25
Shh-201ENSMUST00000002708 Znf385cA2A5E6 429 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm14325A2AW67 498 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 1500009C09RikD3YYW9 81 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Smim9Q3V0X1 137 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Prss3Q792Z0 246 aaKnown RBP13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr399Q7TRX3 311 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Harbi1Q8BR93 349 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Pxmp4Q9JJW0 212 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 St6galnac6Q9JM95 333 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Hsd17b6Q9R092 317 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Folr2Q05685 251 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Fbxw26Q8BI58 466 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Cbln4Q8BME9 198 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Slc25a48Q8BW66 306 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Nrn1Q8CFV4 142 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Q8VC23 124 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr1323Q8VF35 309 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Rer1Q9CQU3 196 aaKnown RBP13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 H2al3Q9D4U4 128 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 GgctQ9D7X8 188 aa13.48□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm21882J3QN86 361 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Ly6c1P0CW02 131 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Oprk1P33534 380 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Higd1bQ99JY6 98 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Chchd1Q9CQA6 118 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr1382Q7TQT3 311 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Pygo2Q80V76 405 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Ssbp2Q9CYZ8 361 aa13.47□□□□□ -0.25
Shh-201ENSMUST00000002708 Scgb1b15A0A087WP50 93 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Trav13n-4A0A0G2JG01 110 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Zfp976E9Q981 636 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm4133K9J7G6 307 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Xaf1Q5NBU8 273 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 MiaQ61865 130 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr1371Q7TQT7 311 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Oraov1Q8CH62 137 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 H2afb1Q9CQ70 111 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Mbnl1Q9JKP5 341 aaKnown RBP13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Pard6aQ9Z101 346 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 PoleQ9WVF7 2283 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm20825J3QM67 227 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Degs1O09005 323 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Zcwpw2Q08EN7 125 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Ssty2Q149W4 227 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm21394Q497R7 227 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm20854Q62461 227 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 C330021F23RikQ8C7T0 141 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 PaxxQ8K0Y7 205 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Rhbdd2Q8VEK2 361 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr513Q8VFZ3 309 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Nus1Q99LJ8 297 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Nudt3Q9JI46 168 aa13.46□□□□□ -0.25
Shh-201ENSMUST00000002708 Wnt5bP22726 359 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Znrd1Q791N7 123 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm5868Q8BJG1 145 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1404Q8VGE1 313 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Trav5-1A0A075B5Z7 114 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr609E9Q4X7 319 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm21244J3QK38 227 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Timp3P39876 211 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Ypel2Q65Z95 119 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1178Q7TR20 323 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr153Q7TR48 307 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr859Q7TRF5 309 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Lrrc20Q8CI70 184 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Rab31Q921E2 194 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Cml1Q9JIZ0 222 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Wfdc11A2A5H7 82 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr466E9Q2B9 308 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm10130F6ZHM5 101 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Ccl3P10855 92 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Ssty1P13675 232 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms