RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	OPRPN	Q99935	248 aa	Predicted RBP	4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	SLIRP	Q9GZT3	109 aa	Known RBP	4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	MRPL36	Q9P0J6	103 aa	Known RBP	4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	XCL2	Q9UBD3	114 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	ZFP92	A6NM28	416 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	SELENOT	P62341	195 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	PSMG4	Q5JS54	123 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	C1orf194	Q5T5A4	169 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	LGALS9C	Q6DKI2	356 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	DCANP1	Q8TF63	244 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	HIST1H4G	Q99525	98 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	SOST	Q9BQB4	213 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	PRO0628	Q9UI54	55 aa		4.44	□□□□□ -1.7
CASC19-238	ENST00000641523	HYDIN	Q4G0P3	5121 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	IGLV4-3	A0A075B6K6	122 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	CCDC160	A6NGH7	325 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	SNRPGP15	A8MWD9	76 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	AGPAT2	O15120	278 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	INPP1	P49441	399 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	MEOX2	P50222	304 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	SUPT4H1	P63272	117 aa	Known RBP	4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	FLI1	Q01543	452 aa	Predicted RBP	4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	PYDC2	Q56P42	97 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	SPATA31B1P	Q5VZV4	182 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	LYZL2	Q7Z4W2	148 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	BLNK	Q8WV28	456 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	SFRP2	Q96HF1	295 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	LINC00479	Q96M42	142 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	SIGMAR1	Q99720	223 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	PBDC1	Q9BVG4	233 aa		4.43	□□□□□ -1.7
CASC19-238	ENST00000641523	TMEM189	A5PLL7	270 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	RBFOX3	A6NFN3	312 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	HLA-DRB4	P13762	266 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	PSMB3	P49720	205 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	TMEM97	Q5BJF2	176 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	FAM24B	Q8N5W8	94 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523		Q8NAQ8	132 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	OR10J6P	Q8NGY7	276 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	COQ8A	Q8NI60	647 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	GPR82	Q96P67	336 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	TRGV9	Q99603	122 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	PAIP2B	Q9ULR5	123 aa	Known RBP	4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	LSM5	Q9Y4Y9	91 aa	Known RBP	4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	HLA-DRB4	X5D2U9	266 aa		4.42	□□□□□ -1.7
CASC19-238	ENST00000641523	TRAV10	A0A0B4J240	114 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	NAP1L6	A6NFF2	107 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	KNCN	A6PVL3	124 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523		H3BMM0	161 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	ISLR	O14498	428 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	ARPC5	O15511	151 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	PITX3	O75364	302 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	UPK1B	O75841	260 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	SFT2D2	O95562	160 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	LYZ	P61626	148 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	RBX1	P62877	108 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	ZC2HC1B	Q5TFG8	222 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	FOXI2	Q6ZQN5	318 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	OR8I2	Q8N0Y5	310 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	AGRN	O00468	2067 aa		4.41	□□□□□ -1.7
CASC19-238	ENST00000641523	IGHV1OR15-1	A0A075B7D0	117 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	SYNGR2	O43760	224 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	GIG44	P09565	113 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	HLA-DMB	P28068	263 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	PRR3	P79522	188 aa	Known RBP	4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	EBLN2	Q6P2I7	272 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	SMIM20	Q8N5G0	67 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	C11orf72	Q8NBR9	251 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	RNF185	Q96GF1	192 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	CHCHD5	Q9BSY4	110 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	OCR1	Q9BZK8	76 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523		V9GYH0	126 aa		4.4	□□□□□ -1.7
CASC19-238	ENST00000641523	RPL37AP8	A6NKH3	93 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	EPM2A	B3EWF7	344 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	IGLL5	B9A064	214 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	DEFB4A	O15263	64 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	ESD	P10768	282 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	IAPP	P10997	89 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	IFITM2	Q01629	132 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF90	Q03938	601 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	AKR1C1	Q04828	323 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	ZNF79	Q15937	498 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	TTC32	Q5I0X7	151 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523		Q6ZTC4	211 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	CSNK1G2-AS1	Q8NCQ2	148 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	FAM210B	Q96KR6	192 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	LINC00052	Q96N35	136 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	TMEM147	Q9BVK8	224 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	RPRM	Q9NS64	109 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	MDFIC	Q9P1T7	246 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	RFNG	Q9Y644	331 aa		4.4	□□□□□ -1.71
CASC19-238	ENST00000641523	IGKV1D-37	A0A075B6S9	117 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523		H7C423	109 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	NDUFB6	O95139	128 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523		P0DMU3	169 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	FAM231A	P0DMU4	169 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	FAM231C	P0DMU5	169 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	S100A1	P23297	94 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	HBG1	P69891	147 aa		4.39	□□□□□ -1.71
CASC19-238	ENST00000641523	HBG2	P69892	147 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms