RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NUTF2P61970 127 aaKnown RBP11.42□□□□□ -0.58
TRIM3-215ENST00000639856 RNF185Q96GF1 192 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 DAZ1Q9NQZ3 744 aaKnown RBP11.42□□□□□ -0.58
TRIM3-215ENST00000639856 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 OVOL1O14753 267 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 FOXE3Q13461 319 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 FAM106AQ4KMX7 169 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 ZNF747Q9BV97 191 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 SELENOKQ9Y6D0 94 aa11.42□□□□□ -0.58
TRIM3-215ENST00000639856 TMEM89A2RUT3 159 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 SMKR1H3BMG3 65 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 NPYP01303 97 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 PPBPP02775 128 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 EDN2P20800 178 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 RPL11P62913 178 aaKnown RBP11.41□□□□□ -0.58
TRIM3-215ENST00000639856 TM4SF20Q53R12 229 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 Q6ZN92 141 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 Q8N2B8 174 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 SMR3AQ99954 134 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 TIMM8BQ9Y5J9 83 aaPredicted RBP11.41□□□□□ -0.58
TRIM3-215ENST00000639856 A0A096LNJ9 63 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 ESM1Q9NQ30 184 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 OTOGQ6ZRI0 2925 aa11.41□□□□□ -0.58
TRIM3-215ENST00000639856 K7EMT4 169 aa11.4□□□□□ -0.58
TRIM3-215ENST00000639856 NCR2O95944 276 aa11.4□□□□□ -0.58
TRIM3-215ENST00000639856 HNRNPA3P51991 378 aaKnown RBP11.4□□□□□ -0.58
TRIM3-215ENST00000639856 PRR9Q5T870 116 aa11.4□□□□□ -0.58
TRIM3-215ENST00000639856 Q6ZQT7 251 aa11.4□□□□□ -0.58
TRIM3-215ENST00000639856 SMPXQ9UHP9 88 aa11.4□□□□□ -0.58
TRIM3-215ENST00000639856 TCF21O43680 179 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 MYOZ3Q8TDC0 251 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 ELANEP08246 267 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 TMEM86BQ8N661 226 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 LAMTOR2Q9Y2Q5 125 aa11.39□□□□□ -0.59
TRIM3-215ENST00000639856 H0Y8G0 127 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 ST20Q9HBF5 79 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
TRIM3-215ENST00000639856 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 SNAI2O43623 268 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 G0S2P27469 103 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 TSPOP30536 169 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 HIST2H2BDQ6DRA6 164 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
TRIM3-215ENST00000639856 MAP1LC3AQ9H492 121 aa11.38□□□□□ -0.59
TRIM3-215ENST00000639856 IGHV4-4A0A075B6R2 117 aa11.37□□□□□ -0.59
TRIM3-215ENST00000639856 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
TRIM3-215ENST00000639856 LGALS1P09382 135 aaKnown RBP11.37□□□□□ -0.59
TRIM3-215ENST00000639856 DEFB1P60022 68 aa11.37□□□□□ -0.59
TRIM3-215ENST00000639856 Q6ZSV7 163 aa11.37□□□□□ -0.59
TRIM3-215ENST00000639856 OR8A1Q8NGG7 326 aa11.37□□□□□ -0.59
TRIM3-215ENST00000639856 IGHV4OR15-8A0A075B7B6 117 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 A0A087WW49 117 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 HBDP02042 147 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 EVI2AP22794 236 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 SMIM15Q7Z3B0 74 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 RNF152Q8N8N0 203 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
TRIM3-215ENST00000639856 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
TRIM3-215ENST00000639856 HIVEP2P31629 2446 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 HSBP1L1C9JCN9 74 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 J3KRW8 73 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 TNFRSF6BO95407 300 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 CACNG7P62955 275 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 BATFQ16520 125 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
TRIM3-215ENST00000639856 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 LINC01546A6NGU7 62 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 F6UB75 175 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 TCTEX1D4Q5JR98 221 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 UFC1Q9Y3C8 167 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 H3BVH4 76 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
TRIM3-215ENST00000639856 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
TRIM3-215ENST00000639856 SRD5A1P18405 259 aa11.34□□□□□ -0.59
TRIM3-215ENST00000639856 FXYD7P58549 80 aa11.34□□□□□ -0.59
TRIM3-215ENST00000639856 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
TRIM3-215ENST00000639856 SYNJ2BPP57105 145 aa11.33□□□□□ -0.6
TRIM3-215ENST00000639856 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
TRIM3-215ENST00000639856 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
TRIM3-215ENST00000639856 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-215ENST00000639856 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
TRIM3-215ENST00000639856 ID1P41134 155 aa11.33□□□□□ -0.6
TRIM3-215ENST00000639856 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
TRIM3-215ENST00000639856 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
TRIM3-215ENST00000639856 LGALS9BQ3B8N2 356 aa11.32□□□□□ -0.6
TRIM3-215ENST00000639856 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
TRIM3-215ENST00000639856 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms