RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 SPRY2O43597 315 aa15.72■□□□□ 0.11
PMS1-222ENST00000639501 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.72■□□□□ 0.11
PMS1-222ENST00000639501 C1QTNF4Q9BXJ3 329 aa15.72■□□□□ 0.11
PMS1-222ENST00000639501 LINC01548A6NM66 108 aa15.71■□□□□ 0.11
PMS1-222ENST00000639501 GLMPQ8WWB7 406 aa15.71■□□□□ 0.11
PMS1-222ENST00000639501 ITPR1Q14643 2758 aa15.71■□□□□ 0.11
PMS1-222ENST00000639501 HOXA3O43365 443 aaPredicted RBP15.7■□□□□ 0.1
PMS1-222ENST00000639501 MRAP2Q96G30 205 aa15.7■□□□□ 0.1
PMS1-222ENST00000639501 MRPL16Q9NX20 251 aaKnown RBP15.7■□□□□ 0.1
PMS1-222ENST00000639501 C8orf86Q6ZUL3 223 aa15.7■□□□□ 0.1
PMS1-222ENST00000639501 PTH2Q96A98 100 aa15.7■□□□□ 0.1
PMS1-222ENST00000639501 PLEKHB2Q96CS7 222 aa15.7■□□□□ 0.1
PMS1-222ENST00000639501 PRSS29PA6NIE9 313 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 LINC01619G3V211 115 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 SMIM2Q9BVW6 85 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 TRAV12-1A0A0B4J245 112 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 LINC01549A6NIU2 74 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 MT-ATP8P03928 68 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 ZFP2Q6ZN57 461 aa15.69■□□□□ 0.1
PMS1-222ENST00000639501 H3BVH4 76 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 LY6HO94772 140 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 TMEM78Q5T7P6 136 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 SPANXN1Q5VSR9 72 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 SVIPQ8NHG7 77 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 IGHV3-49A0A0A0MS15 119 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 BUB3O43684 328 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 CRYBA4P53673 196 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 NEXN-AS1Q8NBZ9 246 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 PRADC1Q9BSG0 188 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 GEMIN7Q9H840 131 aaKnown RBP15.68■□□□□ 0.1
PMS1-222ENST00000639501 ZFAND3Q9H8U3 227 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 CACNA1BQ00975 2339 aa15.68■□□□□ 0.1
PMS1-222ENST00000639501 SCGB2A2Q13296 93 aa15.67■□□□□ 0.1
PMS1-222ENST00000639501 SCGB3A1Q96QR1 104 aa15.67■□□□□ 0.1
PMS1-222ENST00000639501 TRAV8-2A0A0B4J237 113 aa15.67■□□□□ 0.1
PMS1-222ENST00000639501 TSPAN13O95857 204 aa15.67■□□□□ 0.1
PMS1-222ENST00000639501 ACACBO00763 2458 aa15.67■□□□□ 0.1
PMS1-222ENST00000639501 ZFHX3Q15911 3703 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 RBAKDNA6NC62 111 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 PRR9Q5T870 116 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 OR11H6Q8NGC7 330 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 DLX4Q92988 240 aaPredicted RBP15.66■□□□□ 0.1
PMS1-222ENST00000639501 PSMB2P49721 201 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 XGP55808 180 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 LY6G5BQ8NDX9 201 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 ZNF418Q8TF45 676 aaPredicted RBP15.66■□□□□ 0.1
PMS1-222ENST00000639501 RPL39LQ96EH5 51 aaKnown RBP15.66■□□□□ 0.1
PMS1-222ENST00000639501 PKD1L2Q7Z442 2459 aa15.66■□□□□ 0.1
PMS1-222ENST00000639501 SPINK8P0C7L1 97 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 Q8NA96 180 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 TOMM6Q96B49 74 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 VKORC1Q9BQB6 163 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 ASH1LQ9NR48 2969 aaKnown RBP15.65■□□□□ 0.1
PMS1-222ENST00000639501 LOC107984156A0A0G2JMH3 177 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 CLPSL1A2RUU4 121 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 ZNF815PA8K554 130 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 ARL17AQ8IVW1 177 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 BAALCQ8WXS3 180 aa15.65■□□□□ 0.1
PMS1-222ENST00000639501 UBE2D1P51668 147 aa15.64■□□□□ 0.09
PMS1-222ENST00000639501 RASL10AQ92737 203 aa15.64■□□□□ 0.09
PMS1-222ENST00000639501 ATP6V0E2Q8NHE4 81 aa15.64■□□□□ 0.09
PMS1-222ENST00000639501 CARD19Q96LW7 228 aa15.64■□□□□ 0.09
PMS1-222ENST00000639501 IGHV4-4A0A075B6R2 117 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 ODF3BA8MYP8 253 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 IGF1P05019 195 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 C15orf32Q32M92 178 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 KLHL30-AS1Q8NEE0 82 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 IGHV7-81A0A0B4J1V7 117 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.63■□□□□ 0.09
PMS1-222ENST00000639501 B9A039 149 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 J3KRW8 73 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 SLC25A16P16260 332 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 Q6ZUT4 128 aa15.63■□□□□ 0.09
PMS1-222ENST00000639501 ABCA4P78363 2273 aa15.62■□□□□ 0.09
PMS1-222ENST00000639501 RNF223E7ERA6 249 aa15.62■□□□□ 0.09
PMS1-222ENST00000639501 COX6B1P14854 86 aa15.62■□□□□ 0.09
PMS1-222ENST00000639501 CLEC3BP05452 202 aa15.62■□□□□ 0.09
PMS1-222ENST00000639501 SUMO2P61956 95 aaKnown RBP15.62■□□□□ 0.09
PMS1-222ENST00000639501 SCGB1D4Q6XE38 83 aa15.62■□□□□ 0.09
PMS1-222ENST00000639501 SLC50A1Q9BRV3 221 aa15.61■□□□□ 0.09
PMS1-222ENST00000639501 M0R381 172 aa15.61■□□□□ 0.09
PMS1-222ENST00000639501 UBE2D3P61077 147 aa15.61■□□□□ 0.09
PMS1-222ENST00000639501 UBE2D2P62837 147 aa15.61■□□□□ 0.09
PMS1-222ENST00000639501 Q8N6K4 173 aa15.61■□□□□ 0.09
PMS1-222ENST00000639501 NBASA2RRP1 2371 aa15.6■□□□□ 0.09
PMS1-222ENST00000639501 CD7P09564 240 aa15.6■□□□□ 0.09
PMS1-222ENST00000639501 C2orf66Q6UXQ4 117 aa15.6■□□□□ 0.09
PMS1-222ENST00000639501 TGFAP01135 160 aa15.6■□□□□ 0.09
PMS1-222ENST00000639501 SRSF9Q13242 221 aaKnown RBP eCLIP15.6■□□□□ 0.09
PMS1-222ENST00000639501 ORMDL2Q53FV1 153 aa15.6■□□□□ 0.09
PMS1-222ENST00000639501 PRR30Q53SZ7 412 aaPredicted RBP15.6■□□□□ 0.09
PMS1-222ENST00000639501 SCGB2A1O75556 95 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 ECSCRQ19T08 205 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 DEFB104AQ8WTQ1 72 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 GATA3P23771 443 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 EMP1P54849 157 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 CCDC140Q96MF4 163 aa15.59■□□□□ 0.09
PMS1-222ENST00000639501 TCL1BO95988 128 aa15.58■□□□□ 0.09
PMS1-222ENST00000639501 TMEM238LA0A1B0GVL6 79 aa15.58■□□□□ 0.08
PMS1-222ENST00000639501 A6NJY4 79 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms