RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PTPRZ1P23471 2315 aaPredicted RBP4.79□□□□□ -1.64
RTTN-215ENST00000639487 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 F2Z2F3 143 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 K7EMI3 77 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 OXTP01178 125 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 KRTDAPP60985 99 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 TMEM252Q8N6L7 170 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 COMMD5Q9GZQ3 224 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 SPANXB1Q9NS25 103 aaPredicted RBP4.79□□□□□ -1.64
RTTN-215ENST00000639487 SPCS1Q9Y6A9 102 aa4.79□□□□□ -1.64
RTTN-215ENST00000639487 BORCS7-ASMTA0A0B4J1R7 106 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 A0A1B0GX51 115 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 FAM181BA6NEQ2 426 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 PRSS29PA6NIE9 313 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 G6PCP35575 357 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 PHLDA2Q53GA4 152 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 TEPPQ6URK8 271 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 FAM19A1Q7Z5A9 133 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 MGST2Q99735 147 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 C20orf78Q9BR46 151 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 MLST8Q9BVC4 326 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 TMEM242Q9NWH2 141 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 GNG13Q9P2W3 67 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 LY6HO94772 140 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 CD28P10747 220 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 LEPP41159 167 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 VKORC1L1Q8N0U8 176 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 TMEM167BQ9NRX6 74 aa4.78□□□□□ -1.64
RTTN-215ENST00000639487 TRAV8-2A0A0B4J237 113 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 E7EUB6 86 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 H3BUT2 72 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 H7C423 109 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 RHODO00212 210 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 IGLC6P0CF74 106 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 DMRTC1Q5HYR2 192 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 UBALD1Q8TB05 177 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 RBMXL1Q96E39 390 aaKnown RBP4.77□□□□□ -1.65
RTTN-215ENST00000639487 SLC25A2Q9BXI2 301 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 SMAD5-AS1Q9Y6J3 95 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 ABCA4P78363 2273 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 DYNC1H1Q14204 4646 aaKnown RBP4.77□□□□□ -1.65
RTTN-215ENST00000639487 C11orf94C9JXX5 98 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 GALR1P47211 349 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 EWSR1Q01844 656 aaKnown RBP eCLIP4.77□□□□□ -1.65
RTTN-215ENST00000639487 SLC38A11Q08AI6 406 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
RTTN-215ENST00000639487 Q8N976 141 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 OR10AG1Q8NH19 301 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 ST20Q9HBF5 79 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 FBXL7Q9UJT9 491 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 USP9XQ93008 2570 aaPredicted RBP4.77□□□□□ -1.65
RTTN-215ENST00000639487 RTTNQ86VV8 2226 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 C9orf118A6NHY6 69 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 LINC00310P59036 64 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 FXYD5Q96DB9 178 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 NPCDR1Q9BY65 106 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 ZNF331Q9NQX6 463 aaPredicted RBP4.77□□□□□ -1.65
RTTN-215ENST00000639487 CADP27708 2225 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 CNTRLQ7Z7A1 2325 aa4.77□□□□□ -1.65
RTTN-215ENST00000639487 TRBV19A0A075B6N1 114 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 A6NDN8 102 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 LINC01549A6NIU2 74 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 APOC4P55056 127 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 LINC01559Q495D7 138 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 MRPL54Q6P161 138 aaKnown RBP4.76□□□□□ -1.65
RTTN-215ENST00000639487 MOB3BQ86TA1 216 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 EXOC3-AS1Q8N2X6 119 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 TAF15Q92804 592 aaKnown RBP eCLIP4.76□□□□□ -1.65
RTTN-215ENST00000639487 ANKHD1Q8IWZ3 2542 aaKnown RBP4.76□□□□□ -1.65
RTTN-215ENST00000639487 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 A0A087WW49 117 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 GIG44P09565 113 aaPredicted RBP4.76□□□□□ -1.65
RTTN-215ENST00000639487 CBLN1P23435 193 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 SP6Q3SY56 376 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 TTC32Q5I0X7 151 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 C20orf173Q96LM9 149 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 C9orf85Q96MD7 179 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 LINC01587Q99440 93 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 CACNA1DQ01668 2161 aa4.76□□□□□ -1.65
RTTN-215ENST00000639487 IGKV1OR2-108A0A075B7D4 117 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 FCN1O00602 326 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 SERF1AO75920 110 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 GATA2P23769 480 aaPredicted RBP4.75□□□□□ -1.65
RTTN-215ENST00000639487 ZNF506Q5JVG8 444 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 OR10J6PQ8NGY7 276 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 CARD19Q96LW7 228 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 IGF2BP2-AS1Q96M15 143 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 CACNG5Q9UF02 275 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 RABAC1Q9UI14 185 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 DCHS2Q6V1P9 2916 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 TNXBP22105 4242 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 PKD1P98161 4303 aa4.75□□□□□ -1.65
RTTN-215ENST00000639487 NSD1Q96L73 2696 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms