RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
CLN8-211ENST00000636934 TEX29Q8N6K0 151 aa13.98□□□□□ -0.17
CLN8-211ENST00000636934 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
CLN8-211ENST00000636934 J3KRW8 73 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 EVI2AP22794 236 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
CLN8-211ENST00000636934 BATFQ16520 125 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 DEFB125Q8N687 156 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 Q8N8P6 123 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 OR2K2Q8NGT1 345 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 DCANP1Q8TF63 244 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 UBE2E2Q96LR5 201 aa13.97□□□□□ -0.17
CLN8-211ENST00000636934 SVEP1Q4LDE5 3571 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 hDV102S1A0JD36 115 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 PRSS47A8MTI9 375 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 HOXA3O43365 443 aaPredicted RBP13.96□□□□□ -0.17
CLN8-211ENST00000636934 RNF152Q8N8N0 203 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 IFI27L1Q96BM0 104 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 Q96MF0 132 aa13.96□□□□□ -0.17
CLN8-211ENST00000636934 FCER1GP30273 86 aa13.96□□□□□ -0.18
CLN8-211ENST00000636934 SLC25A34Q6PIV7 304 aa13.96□□□□□ -0.18
CLN8-211ENST00000636934 DPF1Q92782 380 aa13.96□□□□□ -0.18
CLN8-211ENST00000636934 ODF3Q96PU9 254 aa13.96□□□□□ -0.18
CLN8-211ENST00000636934 F6UB75 175 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 TCAPO15273 167 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
CLN8-211ENST00000636934 ANXA2RQ3ZCQ2 193 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 C10orf99Q6UWK7 81 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 GOLT1BQ9Y3E0 138 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 PHLDA3Q9Y5J5 127 aa13.95□□□□□ -0.18
CLN8-211ENST00000636934 CSPG4Q6UVK1 2322 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 VPS13CQ709C8 3753 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 SRD5A1P18405 259 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 LEPP41159 167 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 Q6ZQT7 251 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 PMCHL2Q9BQD1 86 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 CR1P17927 2039 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 ZFYVE26Q68DK2 2539 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 KLLNB2CW77 178 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 DEFB1P60022 68 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 WFDC3Q8IUB2 231 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
CLN8-211ENST00000636934 PRRC2AP48634 2157 aaKnown RBP13.93□□□□□ -0.18
CLN8-211ENST00000636934 LRRK2Q5S007 2527 aa13.93□□□□□ -0.18
CLN8-211ENST00000636934 UTP20O75691 2785 aaKnown RBP13.92□□□□□ -0.18
CLN8-211ENST00000636934 PSMG4Q5JS54 123 aa13.92□□□□□ -0.18
CLN8-211ENST00000636934 Q8N2B8 174 aa13.92□□□□□ -0.18
CLN8-211ENST00000636934 NRACQ8N912 160 aa13.92□□□□□ -0.18
CLN8-211ENST00000636934 OR1N2Q8NGR9 330 aa13.92□□□□□ -0.18
CLN8-211ENST00000636934 DPH3P1Q9H4G8 78 aa13.92□□□□□ -0.18
CLN8-211ENST00000636934 EDN2P20800 178 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 SYNJ2BPP57105 145 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 MCRIP2Q9BUT9 160 aaKnown RBP13.91□□□□□ -0.18
CLN8-211ENST00000636934 IGHV4OR15-8A0A075B7B6 117 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 A0A087WW49 117 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 K7EQG2 157 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 M0R381 172 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 GAS8-AS1O95177 125 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 GATA1P15976 413 aaPredicted RBP13.91□□□□□ -0.18
CLN8-211ENST00000636934 FAM159AQ6UWV7 190 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 TMEM86BQ8N661 226 aa13.91□□□□□ -0.18
CLN8-211ENST00000636934 IGLV2-18A0A075B6J9 118 aa13.9□□□□□ -0.18
CLN8-211ENST00000636934 PPP1R17O96001 155 aa13.9□□□□□ -0.18
CLN8-211ENST00000636934 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
CLN8-211ENST00000636934 AP1S3Q96PC3 154 aa13.9□□□□□ -0.18
CLN8-211ENST00000636934 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
CLN8-211ENST00000636934 ATP5LO75964 103 aa13.89□□□□□ -0.19
CLN8-211ENST00000636934 DUSP14O95147 198 aaKnown RBP13.89□□□□□ -0.19
CLN8-211ENST00000636934 FXYD7P58549 80 aa13.89□□□□□ -0.19
CLN8-211ENST00000636934 LAGE3Q14657 143 aa13.89□□□□□ -0.19
CLN8-211ENST00000636934 NXPH4O95158 308 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 ZNF688P0C7X2 276 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 TFPI2P48307 235 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 C20orf78Q9BR46 151 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 USP9YO00507 2555 aaPredicted RBP13.88□□□□□ -0.19
CLN8-211ENST00000636934 CELSR1Q9NYQ6 3014 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 A0A0J9YX75 114 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 C7orf71A4D174 169 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 K7EMI3 77 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 COX8AP10176 69 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 CRYBG3Q68DQ2 2970 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 KRTAP1-3Q8IUG1 177 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 TMEM158Q8WZ71 300 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 SELENOKQ9Y6D0 94 aa13.88□□□□□ -0.19
CLN8-211ENST00000636934 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
CLN8-211ENST00000636934 GNRH2O43555 120 aa13.87□□□□□ -0.19
CLN8-211ENST00000636934 RNASE3P12724 160 aaKnown RBP13.87□□□□□ -0.19
CLN8-211ENST00000636934 HINT1P49773 126 aaPredicted RBP13.87□□□□□ -0.19
CLN8-211ENST00000636934 FBN2P35556 2912 aa13.87□□□□□ -0.19
CLN8-211ENST00000636934 STPG4Q8N801 248 aa13.86□□□□□ -0.19
CLN8-211ENST00000636934 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
CLN8-211ENST00000636934 KIR3DS1Q14943 382 aa13.86□□□□□ -0.19
CLN8-211ENST00000636934 MAP1AP78559 2803 aaPredicted RBP13.86□□□□□ -0.19
CLN8-211ENST00000636934 CD5LO43866 347 aa13.85□□□□□ -0.19
CLN8-211ENST00000636934 SMIM17P0DL12 118 aa13.85□□□□□ -0.19
CLN8-211ENST00000636934 ZNF25P17030 456 aaPredicted RBP13.85□□□□□ -0.19
CLN8-211ENST00000636934 ORMDL2Q53FV1 153 aa13.85□□□□□ -0.19
CLN8-211ENST00000636934 C12orf54Q6X4T0 127 aa13.85□□□□□ -0.19
CLN8-211ENST00000636934 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
CLN8-211ENST00000636934 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms