RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TRGV11A0A075B6L2 103 aa11.46□□□□□ -0.57
CLN6-216ENST00000636876 PGPEP1LA6NFU8 196 aa11.46□□□□□ -0.57
CLN6-216ENST00000636876 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
CLN6-216ENST00000636876 SDF2L1Q9HCN8 221 aa11.46□□□□□ -0.57
CLN6-216ENST00000636876 CELA1Q9UNI1 258 aa11.46□□□□□ -0.57
CLN6-216ENST00000636876 MGST1P10620 155 aaKnown RBP11.45□□□□□ -0.58
CLN6-216ENST00000636876 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
CLN6-216ENST00000636876 PRR27Q6MZM9 219 aa11.45□□□□□ -0.58
CLN6-216ENST00000636876 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
CLN6-216ENST00000636876 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
CLN6-216ENST00000636876 ZNF727A8MUV8 499 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 SNURFLB1AK76 121 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 GNRH2O43555 120 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 ORM1P02763 201 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 TYMSP04818 313 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 OCC1Q8TAD7 63 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 WWC2-AS2Q96NR7 200 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 GSN-AS1Q9NRJ2 163 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
CLN6-216ENST00000636876 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 CXorf65A6NEN9 183 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 LYRM9A8MSI8 78 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 B4DEV8 164 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 M0R036 132 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 TCL1AP56279 114 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 DAZ2Q13117 558 aaKnown RBP11.43□□□□□ -0.58
CLN6-216ENST00000636876 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 FAM74A3Q4VXF1 159 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 C11orf45Q8TAV5 145 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
CLN6-216ENST00000636876 MDFICQ9P1T7 246 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
CLN6-216ENST00000636876 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
CLN6-216ENST00000636876 K7EN84 100 aa11.42□□□□□ -0.58
CLN6-216ENST00000636876 OR5I1Q13606 314 aa11.42□□□□□ -0.58
CLN6-216ENST00000636876 LINC00862A6NCI5 91 aa11.41□□□□□ -0.58
CLN6-216ENST00000636876 C19orf71A6NCJ1 209 aa11.41□□□□□ -0.58
CLN6-216ENST00000636876 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
CLN6-216ENST00000636876 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
CLN6-216ENST00000636876 DAZAP1Q96EP5 407 aaKnown RBP11.41□□□□□ -0.58
CLN6-216ENST00000636876 UQCC3Q6UW78 93 aa11.4□□□□□ -0.58
CLN6-216ENST00000636876 COMMD7Q86VX2 200 aa11.4□□□□□ -0.58
CLN6-216ENST00000636876 SPXQ9BT56 116 aa11.4□□□□□ -0.58
CLN6-216ENST00000636876 TMSB15BA0A087X1C1 80 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 CXCL1P09341 107 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 ASIPP42127 132 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
CLN6-216ENST00000636876 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 C12orf74Q32Q52 190 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 DNLZQ5SXM8 178 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
CLN6-216ENST00000636876 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 SPINK4O60575 86 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 P01737 135 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 DEFB130BP0DP73 79 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 DEFB130AP0DP74 79 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
CLN6-216ENST00000636876 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
CLN6-216ENST00000636876 DAD1P61803 113 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 Q6ZTI0 123 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 C9orf85Q96MD7 179 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
CLN6-216ENST00000636876 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 GAGE7O76087 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 LGALS9BQ3B8N2 356 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 Q6ZTC4 211 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 OR2D3Q8NGH3 330 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 NUDT11Q96G61 164 aa11.37□□□□□ -0.59
CLN6-216ENST00000636876 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
CLN6-216ENST00000636876 MRPL16Q9NX20 251 aaKnown RBP11.37□□□□□ -0.59
CLN6-216ENST00000636876 H3BVH4 76 aa11.36□□□□□ -0.59
CLN6-216ENST00000636876 M0R2P5 195 aa11.36□□□□□ -0.59
CLN6-216ENST00000636876 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
CLN6-216ENST00000636876 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
CLN6-216ENST00000636876 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
CLN6-216ENST00000636876 IL36BQ9NZH7 164 aa11.36□□□□□ -0.59
CLN6-216ENST00000636876 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
CLN6-216ENST00000636876 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
CLN6-216ENST00000636876 ADIRFQ15847 76 aa11.35□□□□□ -0.59
CLN6-216ENST00000636876 RPP21Q9H633 154 aaKnown RBP11.35□□□□□ -0.59
CLN6-216ENST00000636876 MUC4Q99102 2169 aa11.35□□□□□ -0.59
CLN6-216ENST00000636876 TMEM218A2RU14 115 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms