RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 GYPEP15421 78 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 SERF2P84101 59 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 ZFP69Q49AA0 526 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
PNKP-225ENST00000636214 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
PNKP-225ENST00000636214 K7EQD1 137 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 ATP6V0CP27449 155 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 GCHFRP30047 84 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 ASB13Q8WXK3 278 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
PNKP-225ENST00000636214 BORCS7-ASMTA0A0B4J1R7 106 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 GNRH2O43555 120 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 CXorf1O96002 111 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 TYMSP04818 313 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 GIPP09681 153 aaPredicted RBP12.28□□□□□ -0.44
PNKP-225ENST00000636214 SH2D6Q7Z4S9 175 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 NFE4Q86UQ8 179 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
PNKP-225ENST00000636214 ACTR3CQ9C0K3 210 aaPredicted RBP12.28□□□□□ -0.44
PNKP-225ENST00000636214 TCRAP04437 139 aa12.27□□□□□ -0.45
PNKP-225ENST00000636214 ERVFC1-1P60608 527 aa12.27□□□□□ -0.45
PNKP-225ENST00000636214 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
PNKP-225ENST00000636214 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 TAAR5O14804 337 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 EVI2AP22794 236 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 TVP23CQ96ET8 276 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 PSG8Q9UQ74 426 aa12.26□□□□□ -0.45
PNKP-225ENST00000636214 LRP1BQ9NZR2 4599 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
PNKP-225ENST00000636214 K7EP13 123 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 GCGP01275 180 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
PNKP-225ENST00000636214 PPT1P50897 306 aa12.24□□□□□ -0.45
PNKP-225ENST00000636214 SUMO1P63165 101 aaKnown RBP12.24□□□□□ -0.45
PNKP-225ENST00000636214 FLI1Q01543 452 aaPredicted RBP12.24□□□□□ -0.45
PNKP-225ENST00000636214 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
PNKP-225ENST00000636214 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
PNKP-225ENST00000636214 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
PNKP-225ENST00000636214 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 ZNF876PQ49A33 203 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 SAPCD1Q5SSQ6 148 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 TMEM75Q8N9X5 138 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
PNKP-225ENST00000636214 ABCA13Q86UQ4 5058 aa12.22□□□□□ -0.45
PNKP-225ENST00000636214 CIDEAO60543 219 aa12.22□□□□□ -0.45
PNKP-225ENST00000636214 IFNA7P01567 189 aa12.22□□□□□ -0.45
PNKP-225ENST00000636214 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
PNKP-225ENST00000636214 RPL7L1Q6DKI1 246 aaKnown RBP12.22□□□□□ -0.45
PNKP-225ENST00000636214 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
PNKP-225ENST00000636214 MSRB1Q9NZV6 116 aa12.22□□□□□ -0.45
PNKP-225ENST00000636214 GGTLC3B5MD39 225 aa12.21□□□□□ -0.45
PNKP-225ENST00000636214 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
PNKP-225ENST00000636214 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
PNKP-225ENST00000636214 OR2T35Q8NGX2 323 aa12.21□□□□□ -0.45
PNKP-225ENST00000636214 HSPG2P98160 4391 aa12.21□□□□□ -0.46
PNKP-225ENST00000636214 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 S100A4P26447 101 aaKnown RBP12.2□□□□□ -0.46
PNKP-225ENST00000636214 RHOHQ15669 191 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 Q5BKY6 102 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
PNKP-225ENST00000636214 DNAH5Q8TE73 4624 aa12.19□□□□□ -0.46
PNKP-225ENST00000636214 LOC100131303A0A0U1RQF7 123 aa12.19□□□□□ -0.46
PNKP-225ENST00000636214 CRYGDP07320 174 aa12.19□□□□□ -0.46
PNKP-225ENST00000636214 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
PNKP-225ENST00000636214 ZNF80P51504 273 aaPredicted RBP12.19□□□□□ -0.46
PNKP-225ENST00000636214 NKX6-2Q9C056 277 aaPredicted RBP12.19□□□□□ -0.46
PNKP-225ENST00000636214 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 RNF222A6NCQ9 220 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 RS1O15537 224 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 TIRAPP58753 221 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 UBE2G2P60604 165 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 CDPF1Q6NVV7 123 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
PNKP-225ENST00000636214 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 RGS21Q2M5E4 152 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 OR10J3Q5JRS4 329 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
PNKP-225ENST00000636214 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms