RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 LINC00477Q96M19 166 aa8.16□□□□□ -1.1
PSPC1-207ENST00000635251 CLUHP3Q96NS8 147 aa8.16□□□□□ -1.1
PSPC1-207ENST00000635251 ATP6V0BQ99437 205 aa8.16□□□□□ -1.1
PSPC1-207ENST00000635251 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
PSPC1-207ENST00000635251 LENEPQ9Y5L5 61 aa8.16□□□□□ -1.1
PSPC1-207ENST00000635251 CSMD1Q96PZ7 3565 aa8.16□□□□□ -1.1
PSPC1-207ENST00000635251 IGHV1-69DA0A0B4J2H0 117 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 IGHV1-69P01742 117 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 IGHV3-11P01762 117 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 PF4V1P10720 104 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 LY6EQ16553 131 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.1
PSPC1-207ENST00000635251 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 WNK2Q9Y3S1 2297 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 A0A1W2PPM0 123 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 OVOL1O14753 267 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 SPRY2O43597 315 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 IGHV4-39P01824 125 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 ASIPP42127 132 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
PSPC1-207ENST00000635251 IGKV3-7A0A075B6H7 116 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 A0A087WX48 190 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
PSPC1-207ENST00000635251 C19orf84I3L1E1 186 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 NDUFA4O00483 81 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 FABP2P12104 132 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 FXYD2P54710 66 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 C19orf54Q5BKX5 351 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 SMIM2Q9BVW6 85 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 KLK15Q9H2R5 256 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 RELNP78509 3460 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 CEP295Q9C0D2 2601 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 MGPP08493 103 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 DEFB1P60022 68 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 SAMD5Q5TGI4 173 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 HRNRQ86YZ3 2850 aaPredicted RBP8.14□□□□□ -1.11
PSPC1-207ENST00000635251 SPTA1P02549 2419 aa8.14□□□□□ -1.11
PSPC1-207ENST00000635251 PLNP26678 52 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 RNASE4P34096 147 aaKnown RBP8.13□□□□□ -1.11
PSPC1-207ENST00000635251 CRIP2P52943 208 aaPredicted RBP8.13□□□□□ -1.11
PSPC1-207ENST00000635251 ANXA2RQ3ZCQ2 193 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 GPHB5Q86YW7 130 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 ZFAND2AQ8N6M9 145 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
PSPC1-207ENST00000635251 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 ORMDL2Q53FV1 153 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 OR5A1Q8NGJ0 315 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 PIMREGQ9BSJ6 248 aa8.13□□□□□ -1.11
PSPC1-207ENST00000635251 F6UB75 175 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 HLA-DRB4P13762 266 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 SUMO2P61956 95 aaKnown RBP8.12□□□□□ -1.11
PSPC1-207ENST00000635251 CEND1Q8N111 149 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
PSPC1-207ENST00000635251 HLA-DRB4X5D2U9 266 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 H3BUX3 64 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 H7C1H1 209 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 K7ERJ3 54 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 SOCS3O14543 225 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 SAP30O75446 220 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 GNLYP22749 145 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 RASL10AQ92737 203 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 RPL39LQ96EH5 51 aaKnown RBP8.12□□□□□ -1.11
PSPC1-207ENST00000635251 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
PSPC1-207ENST00000635251 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
PSPC1-207ENST00000635251 GNRH2O43555 120 aa8.11□□□□□ -1.11
PSPC1-207ENST00000635251 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
PSPC1-207ENST00000635251 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
PSPC1-207ENST00000635251 F8VRH5 84 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 C20orf78Q9BR46 151 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 H3BUA1 57 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 K7EMI3 77 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 IGHG2P01859 326 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 SLC25A16P16260 332 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 TOMM6Q96B49 74 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
PSPC1-207ENST00000635251 NBASA2RRP1 2371 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 SRD5A1P18405 259 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 BLCAPP62952 87 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 CCL19Q99731 98 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 COL6A6A6NMZ7 2263 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 OR11H12B2RN74 326 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 C2orf66Q6UXQ4 117 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 OR11H1Q8NG94 326 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 OR11H2Q8NH07 326 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
PSPC1-207ENST00000635251 A6NDX4 124 aa8.08□□□□□ -1.12
PSPC1-207ENST00000635251 TAL2Q16559 108 aa8.08□□□□□ -1.12
PSPC1-207ENST00000635251 FAM19A4Q96LR4 140 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms