RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 LINC00310P59036 64 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 APRG1Q8IVJ8 170 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 TMEM191AQ9H0A3 160 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 LY96Q9Y6Y9 160 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 NBEAL1Q6ZS30 2694 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 IGHV1-24A0A0C4DH33 117 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 WI2-2373I1.2A0A1W2PRP0 233 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 DEFB131AP59861 70 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 MBD6Q96DN6 1003 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 DAZ1Q9NQZ3 744 aaKnown RBP5.76□□□□□ -1.49
PKP4-217ENST00000628904 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 A0A087X0K7 114 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 FSTL3O95633 263 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 IGLV2-11P01706 119 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 IGHV3-53P01767 116 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 ANXA2RQ3ZCQ2 193 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 COX19Q49B96 90 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 MRPL51Q4U2R6 128 aaKnown RBP5.76□□□□□ -1.49
PKP4-217ENST00000628904 KLHDC1Q8N7A1 406 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 AP1S3Q96PC3 154 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 FOXC2Q99958 501 aa5.76□□□□□ -1.49
PKP4-217ENST00000628904 SETXQ7Z333 2677 aaKnown RBP5.76□□□□□ -1.49
PKP4-217ENST00000628904 IGKV3OR2-268A0A0C4DH90 116 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 MAP1LC3AQ9H492 121 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 IGHV3-16A0A0C4DH30 117 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 NUTF2P61970 127 aaKnown RBP5.75□□□□□ -1.49
PKP4-217ENST00000628904 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 SNHG12Q9BXW3 62 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 ID1P41134 155 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 SNRPD3P62318 126 aaKnown RBP5.75□□□□□ -1.49
PKP4-217ENST00000628904 TCTEX1D4Q5JR98 221 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 OR10J3Q5JRS4 329 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 PIFOQ8TCI5 191 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 SLC50A1Q9BRV3 221 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 NDUFAF3Q9BU61 184 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 TMEM14CQ9P0S9 112 aa5.75□□□□□ -1.49
PKP4-217ENST00000628904 IGHV4OR15-8A0A075B7B6 117 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 A0A087WW49 117 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 INS-IGF2F8WCM5 200 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 IGLL1P15814 213 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 PTTG1IPP53801 180 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 XCL2Q9UBD3 114 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 HSPB8Q9UJY1 196 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 MYCNOSP40205 109 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 ASIPP42127 132 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 PLP1P60201 277 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 DEFB113Q30KQ7 82 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 JMJD8Q96S16 334 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 SIGLEC8Q9NYZ4 499 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 NDUFS8O00217 210 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 TCF21O43680 179 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 HOXD3P31249 432 aaPredicted RBP5.74□□□□□ -1.49
PKP4-217ENST00000628904 PAX2Q02962 417 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 FAM231DQ6ZW35 169 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 Q8N6K4 173 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 GOLT1BQ9Y3E0 138 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 C19orf71A6NCJ1 209 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 TMEM8BA6NDV4 472 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 RPL35AP18077 110 aaKnown RBP5.74□□□□□ -1.49
PKP4-217ENST00000628904 CFHR3Q02985 330 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 Q0VG73 95 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 GTSCR1Q86UQ5 136 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 TMEM158Q8WZ71 300 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 C11orf21Q9P2W6 132 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 KLF12Q9Y4X4 402 aa5.74□□□□□ -1.49
PKP4-217ENST00000628904 TRAV9-1A0A075B6T8 112 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 PDE6HQ13956 83 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
PKP4-217ENST00000628904 SRSF8Q9BRL6 282 aaKnown RBP5.73□□□□□ -1.49
PKP4-217ENST00000628904 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 SLC25A16P16260 332 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 C1orf194Q5T5A4 169 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 PRR9Q5T870 116 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 UQCR10Q9UDW1 63 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 NOTCH1P46531 2555 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 CLPSL1A2RUU4 121 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 TNFRSF6BO95407 300 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 GAGE1Q13065 139 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 RNASE13Q5GAN3 156 aaKnown RBP5.73□□□□□ -1.49
PKP4-217ENST00000628904 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 LYPD1Q8N2G4 141 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 MYOZ3Q8TDC0 251 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 LINC01587Q99440 93 aa5.73□□□□□ -1.49
PKP4-217ENST00000628904 M0QZK8 103 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 GCSHP23434 173 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 DKK2Q9UBU2 259 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 FAM223BA6NKX1 122 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 IGHG2P01859 326 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 ATP5L2Q7Z4Y8 100 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 SPATA12Q7Z6I5 190 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 FAM223AQ8IWN6 122 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 MS4A6AQ9H2W1 248 aa5.72□□□□□ -1.49
PKP4-217ENST00000628904 TRAV21A0A0B4J279 112 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms