RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 CELA1Q9UNI1 258 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 SH2D1AO60880 128 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
PNKP-221ENST00000627317 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 ZNF415Q09FC8 603 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 PEA15Q15121 130 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 PARLQ9H300 379 aa10.53□□□□□ -0.72
PNKP-221ENST00000627317 TIMM8BQ9Y5J9 83 aaPredicted RBP10.53□□□□□ -0.72
PNKP-221ENST00000627317 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
PNKP-221ENST00000627317 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 IBA57Q5T440 356 aaKnown RBP10.52□□□□□ -0.73
PNKP-221ENST00000627317 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 SMIM12Q96EX1 92 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 MLST8Q9BVC4 326 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 GSN-AS1Q9NRJ2 163 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 DKK2Q9UBU2 259 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
PNKP-221ENST00000627317 TRBV20OR9-2A0A075B6H5 130 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 PLAC8L1A1L4L8 177 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 ORM1P02763 201 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
PNKP-221ENST00000627317 TCL1AP56279 114 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 NANOS2P60321 138 aaKnown RBP10.51□□□□□ -0.73
PNKP-221ENST00000627317 C11orf72Q8NBR9 251 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 NOP10Q9NPE3 64 aaKnown RBP10.51□□□□□ -0.73
PNKP-221ENST00000627317 C11orf21Q9P2W6 132 aa10.51□□□□□ -0.73
PNKP-221ENST00000627317 HYDINQ4G0P3 5121 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 C9JCJ5 164 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 M0R036 132 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 TYMSP04818 313 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 CRIP1P50238 77 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 DAD1P61803 113 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 SMIM7Q9BQ49 75 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 SMDT1Q9H4I9 107 aa10.5□□□□□ -0.73
PNKP-221ENST00000627317 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 B4DEV8 164 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 GNRH2O43555 120 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 IGLV2-8P01709 118 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 SRSF3P84103 164 aaKnown RBP10.49□□□□□ -0.73
PNKP-221ENST00000627317 BIN3Q9NQY0 253 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
PNKP-221ENST00000627317 IGHV3-16A0A0C4DH30 117 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 ZNF727A8MUV8 499 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 DEFB130BP0DP73 79 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 DEFB130AP0DP74 79 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
PNKP-221ENST00000627317 OR5I1Q13606 314 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
PNKP-221ENST00000627317 DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
PNKP-221ENST00000627317 TMSB15BA0A087X1C1 80 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 IGKV3D-20A0A0C4DH25 116 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 KRBOX1C9JBD0 128 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 C9JQL5 133 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 S100A4P26447 101 aaKnown RBP10.47□□□□□ -0.73
PNKP-221ENST00000627317 ASIPP42127 132 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 LINC01559Q495D7 138 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 CEMP1Q6PRD7 247 aaPredicted RBP10.47□□□□□ -0.73
PNKP-221ENST00000627317 Q6ZTC4 211 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 SPXQ9BT56 116 aa10.47□□□□□ -0.73
PNKP-221ENST00000627317 GAGE12BA1L429 117 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 GAGE7O76087 117 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 GAGE12FP0CL80 117 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 GAGE12GP0CL81 117 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 GAGE12IP0CL82 117 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 FAM74A3Q4VXF1 159 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 Q6ZTI0 123 aa10.46□□□□□ -0.73
PNKP-221ENST00000627317 PHLDA1Q8WV24 401 aaPredicted RBP10.46□□□□□ -0.73
PNKP-221ENST00000627317 SPINK4O60575 86 aa10.45□□□□□ -0.74
PNKP-221ENST00000627317 HTN3P15516 51 aa10.45□□□□□ -0.74
PNKP-221ENST00000627317 SOHLH1Q5JUK2 328 aa10.45□□□□□ -0.74
PNKP-221ENST00000627317 OCC1Q8TAD7 63 aa10.45□□□□□ -0.74
PNKP-221ENST00000627317 MRPL16Q9NX20 251 aaKnown RBP10.45□□□□□ -0.74
PNKP-221ENST00000627317 LY96Q9Y6Y9 160 aa10.45□□□□□ -0.74
PNKP-221ENST00000627317 TRGV2A0A075B6R0 118 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 TRAV10A0A0B4J240 114 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 H3BVH4 76 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 K7EN84 100 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 P01737 135 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 RPL19P84098 196 aaKnown RBP10.44□□□□□ -0.74
PNKP-221ENST00000627317 LGALS9BQ3B8N2 356 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
PNKP-221ENST00000627317 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
PNKP-221ENST00000627317 M0R2P5 195 aa10.43□□□□□ -0.74
PNKP-221ENST00000627317 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
PNKP-221ENST00000627317 LINC00612Q8N6U2 182 aa10.43□□□□□ -0.74
PNKP-221ENST00000627317 OR2D3Q8NGH3 330 aa10.43□□□□□ -0.74
PNKP-221ENST00000627317 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
PNKP-221ENST00000627317 EPPK1P58107 5090 aaKnown RBP10.42□□□□□ -0.74
PNKP-221ENST00000627317 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms