RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 Q8N976 141 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 CNFNQ9BYD5 112 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 ESM1Q9NQ30 184 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 CUBNO60494 3623 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 ACANP16112 2415 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 AKAP9Q99996 3911 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 C3orf79P0CE67 100 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 SLURP1P55000 103 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 TDRG1Q3Y452 100 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 Q6ZSV7 163 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 TMEM86BQ8N661 226 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 FAM19A4Q96LR4 140 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 YAE1D1Q9NRH1 226 aa14.77□□□□□ -0.04
CHRNA4-209ENST00000627000 MYO9AB2RTY4 2548 aa14.77□□□□□ -0.05
CHRNA4-209ENST00000627000 LGALS9O00182 355 aa14.77□□□□□ -0.05
CHRNA4-209ENST00000627000 MRPL51Q4U2R6 128 aaKnown RBP14.77□□□□□ -0.05
CHRNA4-209ENST00000627000 TEX29Q8N6K0 151 aa14.77□□□□□ -0.05
CHRNA4-209ENST00000627000 ID1P41134 155 aa14.76□□□□□ -0.05
CHRNA4-209ENST00000627000 UNC79Q9P2D8 2635 aa14.76□□□□□ -0.05
CHRNA4-209ENST00000627000 C2orf70A6NJV1 201 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 OR10AG1Q8NH19 301 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 CHCHD1Q96BP2 118 aaKnown RBP14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 DUX3Q96PT4 197 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 IGHV1-24A0A0C4DH33 117 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 SMKR1H3BMG3 65 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 CD5LO43866 347 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 ZNF688P0C7X2 276 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 EBLN2Q6P2I7 272 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 U3KQK5 164 aa14.75□□□□□ -0.05
CHRNA4-209ENST00000627000 KHDC1LQ5JSQ8 128 aa14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 ADAMTSL5Q6ZMM2 481 aa14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 WFDC12Q8WWY7 111 aa14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 TMEM191AQ9H0A3 160 aa14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 UQCR10Q9UDW1 63 aa14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 RNASE4P34096 147 aaKnown RBP14.74□□□□□ -0.05
CHRNA4-209ENST00000627000 ANK3Q12955 4377 aaKnown RBP14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 RNF185Q96GF1 192 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 PRELID3AQ96N28 172 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 TRAV21A0A0B4J279 112 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 K7EQG2 157 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 NCR2O95944 276 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 OR11H1Q8NG94 326 aa14.73□□□□□ -0.05
CHRNA4-209ENST00000627000 GCN1Q92616 2671 aaKnown RBP14.72□□□□□ -0.05
CHRNA4-209ENST00000627000 H3BVH4 76 aa14.72□□□□□ -0.05
CHRNA4-209ENST00000627000 BATFQ16520 125 aa14.72□□□□□ -0.05
CHRNA4-209ENST00000627000 LINC00173Q6ZV60 143 aa14.72□□□□□ -0.05
CHRNA4-209ENST00000627000 ORMDL3Q8N138 153 aa14.72□□□□□ -0.05
CHRNA4-209ENST00000627000 LOC389332A0A1B0GUA5 103 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 SPRY2O43597 315 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 GAS8-AS1O95177 125 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 SPATA45Q537H7 98 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 APRG1Q8IVJ8 170 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 TIMM8BQ9Y5J9 83 aaPredicted RBP14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 LINC01619G3V211 115 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 CKS2P33552 79 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 IFI27P40305 119 aaPredicted RBP14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 SAMD13Q5VXD3 122 aa14.71□□□□□ -0.05
CHRNA4-209ENST00000627000 ANXA2RQ3ZCQ2 193 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 DMRTA1Q5VZB9 504 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 PRSS3P2Q8NHM4 247 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 C4orf3Q8WVX3 66 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 SNAI2O43623 268 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 NPYP01303 97 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 OR5AL1P0C617 328 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 EVI2AP22794 236 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 KLHL30-AS1Q8NEE0 82 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 SIGLEC8Q9NYZ4 499 aa14.7□□□□□ -0.06
CHRNA4-209ENST00000627000 FASNP49327 2511 aaKnown RBP14.69□□□□□ -0.06
CHRNA4-209ENST00000627000 NPSP0C0P6 89 aa14.69□□□□□ -0.06
CHRNA4-209ENST00000627000 AGRNO00468 2067 aa14.69□□□□□ -0.06
CHRNA4-209ENST00000627000 TRBV7-9A0A0J9YWB2 115 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 SPATA12Q7Z6I5 190 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 C11orf44Q8N8P7 122 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 OR1N2Q8NGR9 330 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 DPF1Q92782 380 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 KLLNB2CW77 178 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 IGKV3-20P01619 116 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 HNRNPA3P51991 378 aaKnown RBP14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 SNRPD3P62318 126 aaKnown RBP14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 SPANXN1Q5VSR9 72 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 FA2HQ7L5A8 372 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 AP5S1Q9NUS5 200 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 SORL1Q92673 2214 aa14.68□□□□□ -0.06
CHRNA4-209ENST00000627000 GNRH2O43555 120 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 LEPROTL1O95214 131 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 NF1P21359 2839 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 A0A0J9YX75 114 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 C20orf202A1L168 122 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 DLX4Q92988 240 aaPredicted RBP14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 SMR3AQ99954 134 aa14.67□□□□□ -0.06
CHRNA4-209ENST00000627000 GATA1P15976 413 aaPredicted RBP14.66□□□□□ -0.06
CHRNA4-209ENST00000627000 ATOH7Q8N100 152 aa14.66□□□□□ -0.06
CHRNA4-209ENST00000627000 IGHV4-4A0A075B6R2 117 aa14.66□□□□□ -0.06
CHRNA4-209ENST00000627000 Q6ZN92 141 aa14.66□□□□□ -0.06
CHRNA4-209ENST00000627000 IGLC3P0DOY3 106 aa14.65□□□□□ -0.06
CHRNA4-209ENST00000627000 S100A4P26447 101 aaKnown RBP14.65□□□□□ -0.06
CHRNA4-209ENST00000627000 ASIPP42127 132 aa14.65□□□□□ -0.06
CHRNA4-209ENST00000627000 OR9G4Q8NGQ1 327 aa14.65□□□□□ -0.06
CHRNA4-209ENST00000627000 HECTD1Q9ULT8 2610 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms