RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 ZNF80P51504 273 aaPredicted RBP14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 FGF8P55075 233 aaPredicted RBP14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 CYB561D1Q8N8Q1 229 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 RASL10AQ92737 203 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 SPXQ9BT56 116 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 NDFIP1Q9BT67 221 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 UPK3BQ9BT76 320 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 KRTAP1-5Q9BYS1 174 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 PRO0255Q9UI72 69 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 PSG8Q9UQ74 426 aa14.44□□□□□ -0.1
PCDHB4-202ENST00000623478 TAAR5O14804 337 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 CRYBA4P53673 196 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 UBE2G2P60604 165 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 AKR1C8PQ5T2L2 129 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 PRNTQ86SH4 94 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 C6orf223Q8N319 242 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 ZNF479Q96JC4 524 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 SDF2L1Q9HCN8 221 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 C11orf21Q9P2W6 132 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 HHLA3Q9XRX5 114 aa14.43□□□□□ -0.1
PCDHB4-202ENST00000623478 A0A1W2PRE2 83 aa14.42□□□□□ -0.1
PCDHB4-202ENST00000623478 GCGP01275 180 aa14.42□□□□□ -0.1
PCDHB4-202ENST00000623478 FLI1Q01543 452 aaPredicted RBP14.42□□□□□ -0.1
PCDHB4-202ENST00000623478 LINC00479Q96M42 142 aa14.42□□□□□ -0.1
PCDHB4-202ENST00000623478 ICOSQ9Y6W8 199 aa14.42□□□□□ -0.1
PCDHB4-202ENST00000623478 TRGV4A0A0C4DH28 118 aa14.41□□□□□ -0.1
PCDHB4-202ENST00000623478 TMEM75Q8N9X5 138 aa14.41□□□□□ -0.1
PCDHB4-202ENST00000623478 TRAV34A0A0B4J273 112 aa14.4□□□□□ -0.1
PCDHB4-202ENST00000623478 M0R2P5 195 aa14.4□□□□□ -0.1
PCDHB4-202ENST00000623478 TNP2Q05952 138 aa14.4□□□□□ -0.1
PCDHB4-202ENST00000623478 KCNS1Q96KK3 526 aa14.4□□□□□ -0.1
PCDHB4-202ENST00000623478 MAP1LC3B2A6NCE7 125 aa14.39□□□□□ -0.11
PCDHB4-202ENST00000623478 IFNA7P01567 189 aa14.39□□□□□ -0.11
PCDHB4-202ENST00000623478 SLAQ13239 276 aa14.39□□□□□ -0.11
PCDHB4-202ENST00000623478 OR11H4Q8NGC9 324 aa14.39□□□□□ -0.11
PCDHB4-202ENST00000623478 MAP1LC3BQ9GZQ8 125 aa14.39□□□□□ -0.11
PCDHB4-202ENST00000623478 FAM74A7A6NL05 159 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 PFN1P07737 140 aaKnown RBP14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 FHITP49789 147 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 ZFP69Q49AA0 526 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 SMUG1Q53HV7 270 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 TTC32Q5I0X7 151 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 KCNRGQ8N5I3 272 aa14.38□□□□□ -0.11
PCDHB4-202ENST00000623478 TRAV4A0A0B4J268 109 aa14.37□□□□□ -0.11
PCDHB4-202ENST00000623478 PEX7O00628 323 aa14.37□□□□□ -0.11
PCDHB4-202ENST00000623478 ZNF345Q14585 488 aa14.37□□□□□ -0.11
PCDHB4-202ENST00000623478 OR4C5Q8NGB2 326 aa14.37□□□□□ -0.11
PCDHB4-202ENST00000623478 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
PCDHB4-202ENST00000623478 NXPH4O95158 308 aa14.36□□□□□ -0.11
PCDHB4-202ENST00000623478 MRPL23Q16540 153 aaKnown RBP14.36□□□□□ -0.11
PCDHB4-202ENST00000623478 ARL2-SNX15V9GYD0 113 aa14.36□□□□□ -0.11
PCDHB4-202ENST00000623478 RYR1P21817 5038 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 C9JCJ5 164 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 K7EQD1 137 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 GYPEP15421 78 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 SAPCD1Q5SSQ6 148 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 Q86TA4 180 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 ZNF575Q86XF7 245 aa14.35□□□□□ -0.11
PCDHB4-202ENST00000623478 LYPD5Q6UWN5 251 aa14.34□□□□□ -0.11
PCDHB4-202ENST00000623478 NEGR1Q7Z3B1 354 aa14.34□□□□□ -0.11
PCDHB4-202ENST00000623478 PCNPQ8WW12 178 aaKnown RBP14.34□□□□□ -0.11
PCDHB4-202ENST00000623478 LRP1BQ9NZR2 4599 aa14.33□□□□□ -0.11
PCDHB4-202ENST00000623478 A0A1W2PPQ1 181 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 HMSDA8MTL9 139 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 SIVA1O15304 175 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 SRIP30626 198 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 PPT1P50897 306 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 ZNF876PQ49A33 203 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 C9orf85Q96MD7 179 aa14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 NKX6-2Q9C056 277 aaPredicted RBP14.33□□□□□ -0.12
PCDHB4-202ENST00000623478 LOC100131303A0A0U1RQF7 123 aa14.32□□□□□ -0.12
PCDHB4-202ENST00000623478 A0A1B0GVG6 124 aa14.32□□□□□ -0.12
PCDHB4-202ENST00000623478 RNASE3P12724 160 aaKnown RBP14.32□□□□□ -0.12
PCDHB4-202ENST00000623478 DPPA3Q6W0C5 159 aa14.32□□□□□ -0.12
PCDHB4-202ENST00000623478 HIST1H2BAQ96A08 127 aa14.32□□□□□ -0.12
PCDHB4-202ENST00000623478 PCLOQ9Y6V0 5065 aa14.31□□□□□ -0.12
PCDHB4-202ENST00000623478 IGKV3D-20A0A0C4DH25 116 aa14.31□□□□□ -0.12
PCDHB4-202ENST00000623478 BCL2L11O43521 198 aa14.31□□□□□ -0.12
PCDHB4-202ENST00000623478 ORM1P02763 201 aa14.31□□□□□ -0.12
PCDHB4-202ENST00000623478 ZNF471Q9BX82 626 aaPredicted RBP14.31□□□□□ -0.12
PCDHB4-202ENST00000623478 A0A0D9SG52 128 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 A0A1B0GV50 99 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 KANTRA0A1W2PQU2 76 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 SEC11BP0C7V7 166 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 MED14OSP0DP75 135 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 GATA1P15976 413 aaPredicted RBP14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 LINC00315P59091 139 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 CFAP126Q5VTH2 177 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 CST9LP1Q5W188 147 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 STOML3Q8TAV4 291 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 FAM213BQ8TBF2 198 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 ZC2HC1AQ96GY0 325 aa14.3□□□□□ -0.12
PCDHB4-202ENST00000623478 IGHV3-73A0A0B4J1V6 119 aa14.29□□□□□ -0.12
PCDHB4-202ENST00000623478 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
PCDHB4-202ENST00000623478 ZNF506Q5JVG8 444 aa14.29□□□□□ -0.12
PCDHB4-202ENST00000623478 DNAH5Q8TE73 4624 aa14.29□□□□□ -0.12
PCDHB4-202ENST00000623478 RS1O15537 224 aa14.28□□□□□ -0.12
PCDHB4-202ENST00000623478 CRIP1P50238 77 aa14.28□□□□□ -0.12
PCDHB4-202ENST00000623478 SFT2D1Q8WV19 159 aa14.28□□□□□ -0.12
PCDHB4-202ENST00000623478 FABP5P3A8MUU1 101 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms