RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 TCF24Q7RTU0 167 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 LHFPL4Q7Z7J7 247 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 Q8N7P7 452 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 HIST1H2BHQ93079 126 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 HIST1H2BNQ99877 126 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 HIST1H2BMQ99879 126 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 SMR3AQ99954 134 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 TPPP3Q9BW30 176 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 MRPL27Q9P0M9 148 aaKnown RBP3.08□□□□□ -1.92
ATRX-209ENST00000623242 RFNGQ9Y644 331 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 RAI1Q7Z5J4 1906 aaPredicted RBP3.08□□□□□ -1.92
ATRX-209ENST00000623242 AKAP6Q13023 2319 aa3.08□□□□□ -1.92
ATRX-209ENST00000623242 HECTD1Q9ULT8 2610 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 UTP20O75691 2785 aaKnown RBP3.07□□□□□ -1.92
ATRX-209ENST00000623242 ARFGEF3Q5TH69 2177 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 IGLV11-55A0A075B6I3 123 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 IGLV4-3A0A075B6K6 122 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 TRAV5A0A0B4J249 113 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 WI2-2373I1.2A0A1W2PRP0 233 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 SMIM27A0A1W2PRY6 76 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 RBAKDNA6NC62 111 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 LINC01549A6NIU2 74 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 HIGD1CA8MV81 97 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 H3BRN7 92 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 H3BUX3 64 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 M0R2Z0 102 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 FCN3O75636 299 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 EIF3GO75821 320 aaKnown RBP eCLIP3.07□□□□□ -1.92
ATRX-209ENST00000623242 LTAP01374 205 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 PPBPP02775 128 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 CXCL1P09341 107 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 CD24P25063 80 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 CNTFRP26992 372 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 Q0VG73 95 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 PDZD11Q5EBL8 140 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 SPATA31B1PQ5VZV4 182 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 LEMD1Q68G75 181 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 MRPL54Q6P161 138 aaKnown RBP3.07□□□□□ -1.92
ATRX-209ENST00000623242 EBLN2Q6P2I7 272 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 CLEC19AQ6UXS0 136 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 SSX7Q7RTT5 188 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 C11orf42Q8N5U0 333 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 ZNF491Q8N8L2 437 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 ZNF738Q8NE65 137 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 OR4X2Q8NGF9 303 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 CHCHD1Q96BP2 118 aaKnown RBP3.07□□□□□ -1.92
ATRX-209ENST00000623242 FXYD5Q96DB9 178 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 LINC00477Q96M19 166 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 TBX15Q96SF7 602 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 PYGO2Q9BRQ0 406 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 FAM103A1Q9BTL3 118 aaKnown RBP3.07□□□□□ -1.92
ATRX-209ENST00000623242 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 MAP1LC3CQ9BXW4 147 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 ZNRD1Q9P1U0 126 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 PSG8Q9UQ74 426 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 KLF12Q9Y4X4 402 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 LENEPQ9Y5L5 61 aa3.07□□□□□ -1.92
ATRX-209ENST00000623242 IGKV1OR2-108A0A075B7D4 117 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 A0A096LNT2 108 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 IGHV7-81A0A0B4J1V7 117 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 GGTLC3B5MD39 225 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 K7EIM0 57 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 SLC17A3O00476 420 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 SPINK4O60575 86 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 CRLF1O75462 422 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 DUSP14O95147 198 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 BRI3O95415 125 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 IGF1P05019 195 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 GPX1P07203 203 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 FBN2P35556 2912 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 LRBAP50851 2863 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 TCL1AP56279 114 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 CACNG7P62955 275 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 HIST1H1AQ02539 215 aaPredicted RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 CHD3Q12873 2000 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 LY6EQ16553 131 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 SPANXN1Q5VSR9 72 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 LCN12Q6JVE5 192 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 TOMM20LQ6UXN7 152 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 PATE2Q6UY27 113 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 ABCA12Q86UK0 2595 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 C5orf56Q8N8D9 126 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 Q8N9W7 124 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 ZNF502Q8TBZ5 544 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 ZNF418Q8TF45 676 aaPredicted RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 ZNF414Q96IQ9 312 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 SPG11Q96JI7 2443 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 KCNS1Q96KK3 526 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 PGLYRP4Q96LB8 373 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 RCHY1Q96PM5 261 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 DERL1Q9BUN8 251 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 VAMP8Q9BV40 100 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 TMEM191AQ9H0A3 160 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 RNASE7Q9H1E1 156 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 DAZ1Q9NQZ3 744 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 PEF1Q9UBV8 284 aaKnown RBP3.06□□□□□ -1.92
ATRX-209ENST00000623242 LAMTOR2Q9Y2Q5 125 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 CRYBG3Q68DQ2 2970 aa3.06□□□□□ -1.92
ATRX-209ENST00000623242 ARID1AO14497 2285 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms