RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 GTSF1Q8WW33 167 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 PMVKQ15126 192 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 RNASE13Q5GAN3 156 aaKnown RBP12.65□□□□□ -0.38
GABRB3-215ENST00000622697 IGHV7-81A0A0B4J1V7 117 aa12.65□□□□□ -0.39
GABRB3-215ENST00000622697 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.39
GABRB3-215ENST00000622697 NCKAP5O14513 1909 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 TCF15Q12870 199 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 A0A087WX48 190 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE12JA6NER3 117 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE1Q13065 139 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE4Q13068 117 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE5Q13069 117 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 RASL10AQ92737 203 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 CDKN1BP46527 198 aa12.64□□□□□ -0.39
GABRB3-215ENST00000622697 IGHV7-4-1A0A0J9YVY3 117 aa12.63□□□□□ -0.39
GABRB3-215ENST00000622697 ETDBQ3ZM63 59 aa12.63□□□□□ -0.39
GABRB3-215ENST00000622697 C1orf229Q6ZS94 237 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-215ENST00000622697 PTPRQQ9UMZ3 2332 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 I3L3M4 83 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 Q96MF0 132 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 CTSGP08311 255 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 NBL1P41271 181 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 LINC01619G3V211 115 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
GABRB3-215ENST00000622697 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
GABRB3-215ENST00000622697 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 IGLV11-55A0A075B6I3 123 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 CENPVL3A0A0U1RRI6 287 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 F8VRH5 84 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 CRPP02741 224 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 C6orf226Q5I0X4 101 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 HLA-DRB4P13762 266 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 HLA-DRB4X5D2U9 266 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 P0C879 139 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE2BQ13066 116 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE2EQ4V326 116 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 GAGE2DQ9UEU5 116 aa12.61□□□□□ -0.39
GABRB3-215ENST00000622697 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 K7EP13 123 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 C22orf34Q6ZV56 151 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 ZNF503Q96F45 646 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 BLCAPP62952 87 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 VWC2LB2RUY7 222 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 K7EMI3 77 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 GATA3P23771 443 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 CEND1Q8N111 149 aa12.6□□□□□ -0.39
GABRB3-215ENST00000622697 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 IGHV4-61A0A0C4DH41 118 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 H3BMG7 143 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 CR1LQ2VPA4 569 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 NPBQ8NG41 125 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
GABRB3-215ENST00000622697 A0A1W2PPM0 123 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 ANKHD1Q8IWZ3 2542 aaKnown RBP12.59□□□□□ -0.39
GABRB3-215ENST00000622697 K7EP34 96 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 DEFB1P60022 68 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
GABRB3-215ENST00000622697 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.39
GABRB3-215ENST00000622697 IGLV1-47P01700 117 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 ANKRD39Q53RE8 183 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 AZU1P20160 251 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 Q8N7P7 452 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 TNCP24821 2201 aa12.58□□□□□ -0.4
GABRB3-215ENST00000622697 SLC25A20O43772 301 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 ZFP36P26651 326 aaKnown RBP12.57□□□□□ -0.4
GABRB3-215ENST00000622697 PRSS29PA6NIE9 313 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 GAGE7O76087 117 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 TTTY13Q9BZ97 58 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 TSSC4Q9Y5U2 329 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-215ENST00000622697 Q8N9W7 124 aa12.57□□□□□ -0.4
GABRB3-215ENST00000622697 ADORA2A-AS1P86434 159 aa12.56□□□□□ -0.4
GABRB3-215ENST00000622697 LEPROTO15243 131 aa12.56□□□□□ -0.4
GABRB3-215ENST00000622697 CMC4P56277 68 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-215ENST00000622697 NRGNQ92686 78 aa12.56□□□□□ -0.4
GABRB3-215ENST00000622697 JPT2Q9H910 190 aa12.56□□□□□ -0.4
GABRB3-215ENST00000622697 CCL25O15444 150 aa12.56□□□□□ -0.4
GABRB3-215ENST00000622697 IGKV1D-37A0A075B6S9 117 aa12.55□□□□□ -0.4
GABRB3-215ENST00000622697 BUB3O43684 328 aa12.55□□□□□ -0.4
GABRB3-215ENST00000622697 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-215ENST00000622697 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 PFN2P35080 140 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 MUC22E2RYF6 1773 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms