RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PXDNQ92626 1479 aa2.07□□□□□ -2.08
BRCA1-229ENST00000621897 TRAV14DV4A0A0A6YYC5 116 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 hDV103S1A0JD37 113 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 H7C2G1 150 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 K7EP34 96 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 SNCGO76070 127 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 PROSCO94903 275 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 ASIPP42127 132 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 ROMO1P60602 79 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 ZNF816Q0VGE8 651 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-229ENST00000621897 ESRGQ1W209 222 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 PRR9Q5T870 116 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 FAM27BQ5VT28 67 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 LINC00299Q6ZSB3 139 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 Q8IYB0 196 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 Q8N814 137 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 C10orf82Q8WW14 230 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 Q96M85 177 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 DPH3P1Q9H4G8 78 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 THADAQ6YHU6 1953 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 TNRC6AQ8NDV7 1962 aaKnown RBP2.06□□□□□ -2.08
BRCA1-229ENST00000621897 CCDC88CQ9P219 2028 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 ABCC5O15440 1437 aa2.06□□□□□ -2.08
BRCA1-229ENST00000621897 LCTP09848 1927 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 SCN3AQ9NY46 2000 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 IGLV3-12A0A075B6K2 115 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 IGHV1-24A0A0C4DH33 117 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 A0A1B0GU33 70 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 UBE2L5PA0A1B0GUS4 154 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 RBAKDNA6NC62 111 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 GYPAP02724 150 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 ZNF22P17026 224 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-229ENST00000621897 SNCAP37840 140 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 UBE2L3P68036 154 aaKnown RBP2.05□□□□□ -2.08
BRCA1-229ENST00000621897 PEA15Q15121 130 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 Q6ZQT0 140 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 C5orf38Q86SI9 138 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 Q8N8P6 123 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 Q8NAQ8 132 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 ST20-AS1Q8NBB2 130 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 KLF14Q8TD94 323 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-229ENST00000621897 C10orf105Q8TEF2 133 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 SPTSSAQ969W0 71 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 S100A13Q99584 98 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 REG4Q9BYZ8 158 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 EEA1Q15075 1411 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 C10orf71Q711Q0 1435 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 ARHGEF12Q9NZN5 1544 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 ZC3H13Q5T200 1668 aaKnown RBP2.05□□□□□ -2.08
BRCA1-229ENST00000621897 RGPD4Q7Z3J3 1758 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 SLX4Q8IY92 1834 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 MUC4Q99102 2169 aa2.05□□□□□ -2.08
BRCA1-229ENST00000621897 C16orf90A8MZG2 172 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 F8W1H4 67 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 IL5P05113 134 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 SCN4AP35499 1836 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 TCHHQ07283 1943 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 NNATQ16517 81 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 UNQ5815/PRO19632Q6UWF5 114 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 ZNF720Q7Z2F6 126 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 C15orf53Q8NAA6 179 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 SCAPERQ9BY12 1400 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 CST11Q9H112 138 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 HHLA3Q9XRX5 114 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 LAMC3Q9Y6N6 1575 aa2.04□□□□□ -2.08
BRCA1-229ENST00000621897 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 COL24A1Q17RW2 1714 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 MON2Q7Z3U7 1717 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 PRDM15P57071 1507 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 IGKV2D-26A0A0A0MRZ7 120 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 TRAV40A0A0B4J280 105 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 IGHV1-18A0A0C4DH31 117 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 C11orf86A6NJI1 115 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 ZNF705FA8MVS1 300 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 M0R233 179 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 MRPS14O60783 128 aaKnown RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 IGKV4-1P06312 121 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 PIPP12273 146 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 RPL26P61254 145 aaKnown RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 LGALSLQ3ZCW2 172 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-229ENST00000621897 SPANXN1Q5VSR9 72 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 ZNF826PQ6ZT77 177 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 LINC00301Q8NCQ3 95 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 CXCL16Q9H2A7 254 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 UQCR10Q9UDW1 63 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 SHANK1Q9Y566 2161 aa2.03□□□□□ -2.08
BRCA1-229ENST00000621897 SHROOM2Q13796 1616 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 DAPK1P53355 1430 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 SNRNP200O75643 2136 aaKnown RBP2.02□□□□□ -2.09
BRCA1-229ENST00000621897 KIAA1549Q9HCM3 1950 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PTPRFP10586 1907 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PTPRDP23468 1912 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 A0A087WSZ3 146 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 TRAV2A0A0B4J234 112 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PIGBOS1A0A0B4J2F0 54 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms