RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CTSGP08311 255 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 ZNF726P1Q15940 193 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 ASPHD1Q5U4P2 390 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 NDUFAF3Q9BU61 184 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
GGA3-223ENST00000621870 IGHV4OR15-8A0A075B7B6 117 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 A0A087WW49 117 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 IGLV2-23P01705 113 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 TEX43Q6ZNM6 134 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 NPBQ8NG41 125 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
GGA3-223ENST00000621870 IGLV11-55A0A075B6I3 123 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 AGPAT4-IT1Q9H0P7 198 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 LAMA1P25391 3075 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 A0A1B0GW64 132 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 TMEM158Q8WZ71 300 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 SPAG8Q99932 426 aaPredicted RBP7.22□□□□□ -1.25
GGA3-223ENST00000621870 MRPL16Q9NX20 251 aaKnown RBP7.22□□□□□ -1.25
GGA3-223ENST00000621870 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 SPRY2O43597 315 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 FXYD5Q96DB9 178 aa7.22□□□□□ -1.25
GGA3-223ENST00000621870 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 E7EUB6 86 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 IGHG2P01859 326 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 TMEM256Q8N2U0 113 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 OR2K2Q8NGT1 345 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 SPEGQ15772 3267 aa7.21□□□□□ -1.25
GGA3-223ENST00000621870 ZNF815PA8K554 130 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 DYNAPQ8N1N2 210 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 IGF2BP2-AS1Q96M15 143 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 FRYLO94915 3013 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 A0A0J9YY99 117 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 I3L2K1 104 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 PLNP26678 52 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 IL15RAQ13261 267 aa7.21□□□□□ -1.26
GGA3-223ENST00000621870 SETXQ7Z333 2677 aaKnown RBP7.2□□□□□ -1.26
GGA3-223ENST00000621870 A8MWV9 139 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 TNFRSF13BO14836 293 aaPredicted RBP7.2□□□□□ -1.26
GGA3-223ENST00000621870 IGHV4-31P0DP07 118 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 TMEM86BQ8N661 226 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
GGA3-223ENST00000621870 TNFRSF6BO95407 300 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 SRSF2Q01130 221 aaKnown RBP7.2□□□□□ -1.26
GGA3-223ENST00000621870 UTF1Q5T230 341 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 LINC01549A6NIU2 74 aa7.2□□□□□ -1.26
GGA3-223ENST00000621870 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
GGA3-223ENST00000621870 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 LINC01548A6NM66 108 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 PROP1O75360 226 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 IGKCP01834 107 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 SEC11AP67812 179 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 FOXI2Q6ZQN5 318 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
GGA3-223ENST00000621870 LRRC75A-AS1Q8N1F1 130 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 ZNF114Q8NC26 417 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 DNAH14Q0VDD8 3507 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 TNRC18O15417 2968 aaPredicted RBP7.19□□□□□ -1.26
GGA3-223ENST00000621870 PAX4O43316 350 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 PRSS57Q6UWY2 283 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 ODF3L1Q8IXM7 274 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 ZNF625Q96I27 306 aaPredicted RBP7.19□□□□□ -1.26
GGA3-223ENST00000621870 GNRH2O43555 120 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 NPC2P61916 151 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 NEGR1Q7Z3B1 354 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 WIPF2Q8TF74 440 aaPredicted RBP7.19□□□□□ -1.26
GGA3-223ENST00000621870 JPT2Q9H910 190 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 KIAA1549Q9HCM3 1950 aa7.19□□□□□ -1.26
GGA3-223ENST00000621870 C2orf70A6NJV1 201 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 BUB3O43684 328 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 DEFB1P60022 68 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 TMEM61Q8N0U2 210 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 C5orf30Q96GV9 206 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 SPXQ9BT56 116 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 ESM1Q9NQ30 184 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 NHP2Q9NX24 153 aaKnown RBP7.18□□□□□ -1.26
GGA3-223ENST00000621870 GAGE6Q13070 117 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 SS18Q15532 418 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 MORN3Q6PF18 240 aaPredicted RBP7.18□□□□□ -1.26
GGA3-223ENST00000621870 RASL11AQ6T310 242 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 MRPL36Q9P0J6 103 aaKnown RBP7.18□□□□□ -1.26
GGA3-223ENST00000621870 TRAV26-2A0A0B4J265 109 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 TEX22C9J3V5 150 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 ZC2HC1BQ5TFG8 222 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
GGA3-223ENST00000621870 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 A6NDX4 124 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 TRBV12-3P01733 135 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 CGB3P0DN86 165 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 CGB7P0DN87 165 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 S100A7L2Q5SY68 101 aa7.17□□□□□ -1.26
GGA3-223ENST00000621870 MORN5Q5VZ52 161 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms