RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 F5H768 121 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 M0R2N4 97 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 ATP5G1P05496 136 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 UBE2DNLQ8IWF7 75 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
SCAMP4-213ENST00000621748 KLLNB2CW77 178 aa12.61□□□□□ -0.39
SCAMP4-213ENST00000621748 TMEM250H0YL14 139 aa12.61□□□□□ -0.39
SCAMP4-213ENST00000621748 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
SCAMP4-213ENST00000621748 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
SCAMP4-213ENST00000621748 RGS13O14921 159 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 ZNF324O75467 553 aaPredicted RBP12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 CRISP2P16562 243 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 RNF212Q495C1 297 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 C15orf53Q8NAA6 179 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 C11orf52Q96A22 123 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
SCAMP4-213ENST00000621748 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 C7orf71A4D174 169 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 NDUFS6O75380 124 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 RPL35P42766 123 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 GNG4P50150 75 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 BTN1A1Q13410 526 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
SCAMP4-213ENST00000621748 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
SCAMP4-213ENST00000621748 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
SCAMP4-213ENST00000621748 Q86TA4 180 aa12.58□□□□□ -0.4
SCAMP4-213ENST00000621748 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
SCAMP4-213ENST00000621748 BIN3Q9NQY0 253 aa12.58□□□□□ -0.4
SCAMP4-213ENST00000621748 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 GAGE7O76087 117 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 PRR9Q5T870 116 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 Q6ZQT7 251 aa12.57□□□□□ -0.4
SCAMP4-213ENST00000621748 NUDT3O95989 172 aa12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 GCGP01275 180 aa12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 Q6ZR54 194 aa12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 C11orf72Q8NBR9 251 aa12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
SCAMP4-213ENST00000621748 RTL8CO15255 209 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 LTAP01374 205 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 FAM74A3Q4VXF1 159 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 Q6ZTI0 123 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 DAZAP1Q96EP5 407 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
SCAMP4-213ENST00000621748 PKD1P98161 4303 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 PKHD1P08F94 4074 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 FABP5P3A8MUU1 101 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 ZNF727A8MUV8 499 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 SRP19P09132 144 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 HOXA5P20719 270 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 OR5I1Q13606 314 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 EIF4E3Q8N5X7 224 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 C8orf49Q96NF6 230 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 SMIM7Q9BQ49 75 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 PARLQ9H300 379 aa12.54□□□□□ -0.4
SCAMP4-213ENST00000621748 DYNC1H1Q14204 4646 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 FAM162BQ5T6X4 162 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
SCAMP4-213ENST00000621748 MUC4Q99102 2169 aa12.52□□□□□ -0.4
SCAMP4-213ENST00000621748 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.41
SCAMP4-213ENST00000621748 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-213ENST00000621748 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
SCAMP4-213ENST00000621748 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
SCAMP4-213ENST00000621748 TVP23CQ96ET8 276 aa12.52□□□□□ -0.41
SCAMP4-213ENST00000621748 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 A0A0J9YY99 117 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 A0A1B0GVY2 172 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 C9JCJ5 164 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 Q6AWC8 147 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 LINC00588Q9Y4M8 146 aa12.51□□□□□ -0.41
SCAMP4-213ENST00000621748 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
SCAMP4-213ENST00000621748 HERC2O95714 4834 aa12.5□□□□□ -0.41
SCAMP4-213ENST00000621748 ORM1P02763 201 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms