RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MED28Q9H204 178 aa16.4■□□□□ 0.22
ATXN3-253ENST00000621269 SERTM2A0A1B0GWG4 89 aa16.39■□□□□ 0.21
ATXN3-253ENST00000621269 C9JCJ5 164 aa16.39■□□□□ 0.21
ATXN3-253ENST00000621269 STAG3L2P0CL84 134 aa16.39■□□□□ 0.21
ATXN3-253ENST00000621269 STAG3L3P0CL85 134 aa16.39■□□□□ 0.21
ATXN3-253ENST00000621269 Q6ZRN7 208 aaPredicted RBP16.39■□□□□ 0.21
ATXN3-253ENST00000621269 PSMG3Q9BT73 122 aaPredicted RBP16.39■□□□□ 0.21
ATXN3-253ENST00000621269 LY96Q9Y6Y9 160 aa16.39■□□□□ 0.21
ATXN3-253ENST00000621269 K7EQM0 130 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 PTTG1O95997 202 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 MBP02144 154 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 TYMSP04818 313 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 RAB24Q969Q5 203 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 SGK494Q96LW2 274 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 AQP10Q96PS8 301 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 TXNDC17Q9BRA2 123 aa16.38■□□□□ 0.21
ATXN3-253ENST00000621269 EREGO14944 169 aa16.37■□□□□ 0.21
ATXN3-253ENST00000621269 NFE4Q86UQ8 179 aa16.37■□□□□ 0.21
ATXN3-253ENST00000621269 C5orf17Q8NAS9 161 aa16.37■□□□□ 0.21
ATXN3-253ENST00000621269 ASB13Q8WXK3 278 aa16.37■□□□□ 0.21
ATXN3-253ENST00000621269 TCRAP04437 139 aa16.36■□□□□ 0.21
ATXN3-253ENST00000621269 ATP6V0CP27449 155 aa16.36■□□□□ 0.21
ATXN3-253ENST00000621269 GCHFRP30047 84 aa16.36■□□□□ 0.21
ATXN3-253ENST00000621269 SERF2P84101 59 aa16.36■□□□□ 0.21
ATXN3-253ENST00000621269 ERVFC1-1P60608 527 aa16.35■□□□□ 0.21
ATXN3-253ENST00000621269 TNFRSF18Q9Y5U5 241 aa16.35■□□□□ 0.21
ATXN3-253ENST00000621269 ABCA13Q86UQ4 5058 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 K7EP13 123 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 EVI2AP22794 236 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 SH2D6Q7Z4S9 175 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 WFDC10BQ8IUB3 73 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 SUN5Q8TC36 379 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 ACTR3CQ9C0K3 210 aaPredicted RBP16.34■□□□□ 0.21
ATXN3-253ENST00000621269 TMEM167BQ9NRX6 74 aa16.34■□□□□ 0.21
ATXN3-253ENST00000621269 TAAR5O14804 337 aa16.33■□□□□ 0.2
ATXN3-253ENST00000621269 CXorf1O96002 111 aa16.33■□□□□ 0.2
ATXN3-253ENST00000621269 PGPEP1Q9NXJ5 209 aa16.33■□□□□ 0.2
ATXN3-253ENST00000621269 PSG8Q9UQ74 426 aa16.33■□□□□ 0.2
ATXN3-253ENST00000621269 SUMO1P63165 101 aaKnown RBP16.32■□□□□ 0.2
ATXN3-253ENST00000621269 HSPG2P98160 4391 aa16.32■□□□□ 0.2
ATXN3-253ENST00000621269 ZFP69Q49AA0 526 aa16.32■□□□□ 0.2
ATXN3-253ENST00000621269 NHLRC2Q8NBF2 726 aa16.32■□□□□ 0.2
ATXN3-253ENST00000621269 INO80EQ8NBZ0 244 aaPredicted RBP16.32■□□□□ 0.2
ATXN3-253ENST00000621269 SH3BGRL3Q9H299 93 aa16.32■□□□□ 0.2
ATXN3-253ENST00000621269 TNFSF18Q9UNG2 199 aa16.32■□□□□ 0.2
ATXN3-253ENST00000621269 LRP1BQ9NZR2 4599 aa16.31■□□□□ 0.2
ATXN3-253ENST00000621269 GCGP01275 180 aa16.31■□□□□ 0.2
ATXN3-253ENST00000621269 GIPP09681 153 aaPredicted RBP16.31■□□□□ 0.2
ATXN3-253ENST00000621269 ZNF876PQ49A33 203 aa16.31■□□□□ 0.2
ATXN3-253ENST00000621269 MSRB1Q9NZV6 116 aa16.31■□□□□ 0.2
ATXN3-253ENST00000621269 EPDR1Q9UM22 224 aa16.31■□□□□ 0.2
ATXN3-253ENST00000621269 LOC100131303A0A0U1RQF7 123 aa16.3■□□□□ 0.2
ATXN3-253ENST00000621269 FBLL1A6NHQ2 334 aaKnown RBP16.3■□□□□ 0.2
ATXN3-253ENST00000621269 DNAH10OSP0CZ25 163 aa16.3■□□□□ 0.2
ATXN3-253ENST00000621269 GATA1P15976 413 aaPredicted RBP16.3■□□□□ 0.2
ATXN3-253ENST00000621269 ZNF80P51504 273 aaPredicted RBP16.3■□□□□ 0.2
ATXN3-253ENST00000621269 FLI1Q01543 452 aaPredicted RBP16.3■□□□□ 0.2
ATXN3-253ENST00000621269 Q5BKY6 102 aa16.3■□□□□ 0.2
ATXN3-253ENST00000621269 PRNTQ86SH4 94 aa16.3■□□□□ 0.2
ATXN3-253ENST00000621269 Q8N1X5 172 aa16.3■□□□□ 0.2
ATXN3-253ENST00000621269 PFN1P07737 140 aaKnown RBP16.29■□□□□ 0.2
ATXN3-253ENST00000621269 SMUG1Q53HV7 270 aa16.29■□□□□ 0.2
ATXN3-253ENST00000621269 CYB561D1Q8N8Q1 229 aa16.29■□□□□ 0.2
ATXN3-253ENST00000621269 BORCS7-ASMTA0A0B4J1R7 106 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 GGTLC3B5MD39 225 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 CIDEAO60543 219 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 IGLV2-11P01706 119 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 PPT1P50897 306 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 SAPCD1Q5SSQ6 148 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 TMEM75Q8N9X5 138 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 SCRT2Q9NQ03 307 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 C11orf21Q9P2W6 132 aa16.28■□□□□ 0.2
ATXN3-253ENST00000621269 CRYGDP07320 174 aa16.27■□□□□ 0.2
ATXN3-253ENST00000621269 RPL7L1Q6DKI1 246 aaKnown RBP16.27■□□□□ 0.2
ATXN3-253ENST00000621269 C10orf126Q8N4M7 172 aa16.27■□□□□ 0.2
ATXN3-253ENST00000621269 PRADC1Q9BSG0 188 aa16.27■□□□□ 0.2
ATXN3-253ENST00000621269 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 RS1O15537 224 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 TIRAPP58753 221 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 CFAP126Q5VTH2 177 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 CDPF1Q6NVV7 123 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 SLC25A29Q8N8R3 303 aa16.26■□□□□ 0.19
ATXN3-253ENST00000621269 A0A087WTM6 91 aa16.25■□□□□ 0.19
ATXN3-253ENST00000621269 A0A1W2PRE2 83 aa16.25■□□□□ 0.19
ATXN3-253ENST00000621269 C9orf85Q96MD7 179 aa16.25■□□□□ 0.19
ATXN3-253ENST00000621269 IGHV3-73A0A0B4J1V6 119 aa16.24■□□□□ 0.19
ATXN3-253ENST00000621269 TRBV6-4A0A1B0GX49 114 aa16.24■□□□□ 0.19
ATXN3-253ENST00000621269 FUSP35637 526 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATXN3-253ENST00000621269 RHOHQ15669 191 aa16.24■□□□□ 0.19
ATXN3-253ENST00000621269 IGHV3-38A0A0C4DH36 116 aa16.23■□□□□ 0.19
ATXN3-253ENST00000621269 RNF222A6NCQ9 220 aa16.23■□□□□ 0.19
ATXN3-253ENST00000621269 IFNA7P01567 189 aa16.23■□□□□ 0.19
ATXN3-253ENST00000621269 DPPA3Q6W0C5 159 aa16.23■□□□□ 0.19
ATXN3-253ENST00000621269 PTH2Q96A98 100 aa16.23■□□□□ 0.19
ATXN3-253ENST00000621269 TRAV8-6A0A0B4J262 113 aa16.22■□□□□ 0.19
ATXN3-253ENST00000621269 CTXND1A0A1B0GTU2 59 aa16.22■□□□□ 0.19
ATXN3-253ENST00000621269 PGPEP1LA6NFU8 196 aa16.22■□□□□ 0.19
ATXN3-253ENST00000621269 ZNF506Q5JVG8 444 aa16.22■□□□□ 0.19
ATXN3-253ENST00000621269 OR2T35Q8NGX2 323 aa16.22■□□□□ 0.19
ATXN3-253ENST00000621269 LINC00479Q96M42 142 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms