RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 IGHV1-18A0A0C4DH31 117 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 OR4C13Q8NGP0 309 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 FLYWCH2Q96CP2 140 aaKnown RBP8.07□□□□□ -1.12
VPS11-207ENST00000620429 BSNQ9UPA5 3926 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 SPRY3O43610 288 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 PRB1P04280 392 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 EBI3Q14213 229 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 EDA2RQ9HAV5 297 aa8.07□□□□□ -1.12
VPS11-207ENST00000620429 Q71RC1 249 aaPredicted RBP8.06□□□□□ -1.12
VPS11-207ENST00000620429 ZNF71Q9NQZ8 489 aaPredicted RBP8.06□□□□□ -1.12
VPS11-207ENST00000620429 NDUFA4L2Q9NRX3 87 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 ZFYVE26Q68DK2 2539 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 E7EUB6 86 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 HLA-DMBP28068 263 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 TMEM155Q4W5P6 130 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 TMEM75Q8N9X5 138 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 ABCA1O95477 2261 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 PIEZO2Q9H5I5 2752 aa8.06□□□□□ -1.12
VPS11-207ENST00000620429 IGLV1-44P01699 117 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 CRIP1P50238 77 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 CRIP2P52943 208 aaPredicted RBP8.05□□□□□ -1.12
VPS11-207ENST00000620429 PLCE1Q9P212 2302 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 PTPRQQ9UMZ3 2332 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 F8VRH5 84 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 H3BTX0 84 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 ATP5G1P05496 136 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 CRYGBP07316 175 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS11-207ENST00000620429 C10orf55Q5SWW7 151 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
VPS11-207ENST00000620429 ZCCHC24Q8N2G6 241 aaKnown RBP8.05□□□□□ -1.12
VPS11-207ENST00000620429 MRPL36Q9P0J6 103 aaKnown RBP8.05□□□□□ -1.12
VPS11-207ENST00000620429 INS-IGF2F8WCM5 200 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 NDUFA3O95167 84 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 Q8N8P6 123 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 CCL13Q99616 98 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 RPUSD1Q9UJJ7 312 aaKnown RBP8.04□□□□□ -1.12
VPS11-207ENST00000620429 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
VPS11-207ENST00000620429 TEX49A0A1B0GTD5 131 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 RBAKDNA6NC62 111 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 H7C1H1 209 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 LHBP01229 141 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 CFC1BP0CG36 223 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 CFC1P0CG37 223 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 P0DMU3 169 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 FAM231AP0DMU4 169 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 FAM231CP0DMU5 169 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
VPS11-207ENST00000620429 FAM216BQ8N7L0 139 aa8.04□□□□□ -1.12
VPS11-207ENST00000620429 GCN1Q92616 2671 aaKnown RBP8.04□□□□□ -1.12
VPS11-207ENST00000620429 H3BMM0 161 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 TNFRSF6BO95407 300 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 EFNA4P52798 201 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS11-207ENST00000620429 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 FAM215AQ9Y5M1 114 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 IGLV2-18A0A075B6J9 118 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 CD3EP07766 207 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 IGFBPL1Q8WX77 278 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 RNF7Q9UBF6 113 aa8.03□□□□□ -1.12
VPS11-207ENST00000620429 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
VPS11-207ENST00000620429 RAI1Q7Z5J4 1906 aaPredicted RBP8.03□□□□□ -1.12
VPS11-207ENST00000620429 TRGV11A0A075B6L2 103 aa8.02□□□□□ -1.12
VPS11-207ENST00000620429 MRPS12O15235 138 aaKnown RBP8.02□□□□□ -1.12
VPS11-207ENST00000620429 CRYGAP11844 174 aa8.02□□□□□ -1.12
VPS11-207ENST00000620429 COX6B1P14854 86 aa8.02□□□□□ -1.12
VPS11-207ENST00000620429 ZNF56Q15929 161 aa8.02□□□□□ -1.12
VPS11-207ENST00000620429 GAFA1Q96PS6 74 aa8.02□□□□□ -1.12
VPS11-207ENST00000620429 ZNF815PA8K554 130 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 M0R1B8 84 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 PMVKQ15126 192 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 C22orf34Q6ZV56 151 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
VPS11-207ENST00000620429 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 CGB1A6NKQ9 187 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 ZNF672Q499Z4 452 aaPredicted RBP8.01□□□□□ -1.13
VPS11-207ENST00000620429 DEFB121Q5J5C9 76 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 TMEM14CQ9P0S9 112 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 MBD3L4A6NDZ8 208 aaPredicted RBP8.01□□□□□ -1.13
VPS11-207ENST00000620429 MBD3L3A6NE82 208 aaPredicted RBP8.01□□□□□ -1.13
VPS11-207ENST00000620429 MBD3L5A6NJ08 208 aaPredicted RBP8.01□□□□□ -1.13
VPS11-207ENST00000620429 CRYGDP07320 174 aa8.01□□□□□ -1.13
VPS11-207ENST00000620429 ATXN8Q156A1 80 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms