RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 SMIM6P0DI80 62 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 CCL4P13236 92 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 RBP2P50120 134 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 S100A7L2Q5SY68 101 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 C9orf153Q5TBE3 101 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 C12orf73Q69YU5 71 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 C9orf163Q8N9P6 203 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 PPP1R1CQ8WVI7 109 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 PPDPFLQ8WWR9 84 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 SNRNP25Q9BV90 132 aaKnown RBP0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 AP4S1Q9Y587 144 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 SERP1Q9Y6X1 66 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 TMEM2Q9UHN6 1383 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 PRG4Q92954 1404 aaPredicted RBP0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 UHRF1BP1LA0JNW5 1464 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 COL1A1P02452 1464 aaPredicted RBP0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 GRIN2AQ12879 1464 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 NISCHQ9Y2I1 1504 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 SMARCA4P51532 1647 aa0.78□□□□□ -2.29
SPTSSB-205ENST00000620149 TRPM1Q7Z4N2 1603 aa0.78□□□□□ -2.29
SPTSSB-205ENST00000620149 ZSWIM8A7E2V4 1837 aa0.78□□□□□ -2.29
SPTSSB-205ENST00000620149 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 MYO9BQ13459 2157 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 IGKV3-7A0A075B6H7 116 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 IGKV3D-7A0A0C4DH55 119 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 IGKV3OR2-268A0A0C4DH90 116 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 IGKV2-29A2NJV5 120 aaPredicted RBP0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 TMEM218A2RU14 115 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 MCRIP1C9JLW8 97 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 NUPR1O60356 82 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 S100A8P05109 93 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 GYPBP06028 91 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 NPC2P61916 151 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 CATR1Q13166 79 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 TPRXLQ17RH7 258 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 SPATA45Q537H7 98 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 ZCCHC23Q6ZST2 131 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 CYP2G1PQ6ZSU1 146 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 C4orf33Q8N1A6 199 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 LINC00269Q8N2A0 174 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 FAM19A2Q8N3H0 131 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 TSKUQ8WUA8 353 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 PATE1Q8WXA2 126 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 DPH3Q96FX2 82 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 TMEM141Q96I45 108 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 AQP10Q96PS8 301 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 AGPAT4-IT1Q9H0P7 198 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 Q9H521 79 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 MRPL35Q9NZE8 188 aaKnown RBP0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 MRPL36Q9P0J6 103 aaKnown RBP0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 CHCHD2Q9Y6H1 151 aaPredicted RBP0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 ARHGAP31Q2M1Z3 1444 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 NALCNQ8IZF0 1738 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 LAMB4A4D0S4 1761 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 PLXNA3P51805 1871 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 MYH6P13533 1939 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 HELZP42694 1942 aaKnown RBP0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 POLEQ07864 2286 aa0.77□□□□□ -2.29
SPTSSB-205ENST00000620149 CCDC88CQ9P219 2028 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 FRMPD1Q5SYB0 1578 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 DISP1Q96F81 1524 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 RGS12O14924 1447 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 MYOM3Q5VTT5 1437 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 TRBV10-1A0A0K0K1A3 114 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 CCL25O15444 150 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 IGHV3-33P01772 117 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 IGKCP01834 107 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 IFITM1P13164 125 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 CBLN1P23435 193 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 S100A10P60903 97 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 UBE2G1P62253 170 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 CNBPP62633 177 aaKnown RBP0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 GDF5OSQ5U4N7 250 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 SLC48A1Q6P1K1 146 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 LINC00322Q6ZN03 302 aaPredicted RBP0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 SPTSSBQ8NFR3 76 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 MYOZ3Q8TDC0 251 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 SPACA4Q8TDM5 124 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 DMAC1Q96GE9 116 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 SDF2Q99470 211 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 COA4Q9NYJ1 87 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 NDUFA12Q9UI09 145 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 MED12LQ86YW9 2145 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 PTPRFP10586 1907 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 CEP192Q8TEP8 1941 aa0.76□□□□□ -2.29
SPTSSB-205ENST00000620149 KIF13AQ9H1H9 1805 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 RIMS1Q86UR5 1692 aaKnown RBP0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 CFTRP13569 1480 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 DAPK1P53355 1430 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 RP1P56715 2156 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 SHANK1Q9Y566 2161 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 TRBV10-3A0A0K0K1G6 114 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 HIGD1CA8MV81 97 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 M0R143 59 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 FXYD1O00168 92 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 TNFP01375 233 aa0.75□□□□□ -2.29
SPTSSB-205ENST00000620149 TFF1P04155 84 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms