RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
MUC1-228ENST00000620103 PRR27Q6MZM9 219 aa11.31□□□□□ -0.6
MUC1-228ENST00000620103 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
MUC1-228ENST00000620103 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
MUC1-228ENST00000620103 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
MUC1-228ENST00000620103 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 PSG1P11464 419 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 NTF3P20783 257 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 TMEM116Q8NCL8 245 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 ZNF331Q9NQX6 463 aaPredicted RBP11.3□□□□□ -0.6
MUC1-228ENST00000620103 M0R2Z0 102 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
MUC1-228ENST00000620103 GNG7O60262 68 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 BMI1P35226 326 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 IGF2BP2-AS1Q96M15 143 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
MUC1-228ENST00000620103 SPRY2O43597 315 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
MUC1-228ENST00000620103 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 RNF183Q96D59 192 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
MUC1-228ENST00000620103 CRYBB3P26998 211 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 PRR20EP86478 221 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 PRR20CP86479 221 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 PRR20DP86480 221 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 PRR20BP86481 221 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 PRR20AP86496 221 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 RAB31Q13636 194 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 DEFB135Q30KP9 77 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 MRPL54Q6P161 138 aaKnown RBP11.28□□□□□ -0.6
MUC1-228ENST00000620103 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 STPG3Q8N7X2 389 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
MUC1-228ENST00000620103 IGHV3-49A0A0A0MS15 119 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.61
MUC1-228ENST00000620103 SLAQ13239 276 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
MUC1-228ENST00000620103 MS4A6AQ9H2W1 248 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 RNF24Q9Y225 148 aa11.27□□□□□ -0.61
MUC1-228ENST00000620103 A0A0J9YWU9 116 aa11.26□□□□□ -0.61
MUC1-228ENST00000620103 CORTO00230 105 aa11.26□□□□□ -0.61
MUC1-228ENST00000620103 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
MUC1-228ENST00000620103 TEPPQ6URK8 271 aa11.26□□□□□ -0.61
MUC1-228ENST00000620103 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
MUC1-228ENST00000620103 A0A1W2PRE2 83 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
MUC1-228ENST00000620103 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 GRAMD2BQ96HH9 432 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 SPINK4O60575 86 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 NUDT3O95989 172 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 TCL1AP56279 114 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 PSG9Q00887 426 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 TMEM191AQ9H0A3 160 aa11.25□□□□□ -0.61
MUC1-228ENST00000620103 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
MUC1-228ENST00000620103 BIRC6Q9NR09 4857 aa11.24□□□□□ -0.61
MUC1-228ENST00000620103 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
MUC1-228ENST00000620103 SPATA12Q7Z6I5 190 aa11.24□□□□□ -0.61
MUC1-228ENST00000620103 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
MUC1-228ENST00000620103 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 RNASEKQ6P5S7 137 aaKnown RBP11.23□□□□□ -0.61
MUC1-228ENST00000620103 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 SEC11AP67812 179 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
MUC1-228ENST00000620103 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
MUC1-228ENST00000620103 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
MUC1-228ENST00000620103 TAS2R45P59539 299 aa11.22□□□□□ -0.61
MUC1-228ENST00000620103 MLANAQ16655 118 aa11.22□□□□□ -0.61
MUC1-228ENST00000620103 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
MUC1-228ENST00000620103 NUPR2A6NF83 97 aa11.21□□□□□ -0.61
MUC1-228ENST00000620103 GGTLC3B5MD39 225 aa11.21□□□□□ -0.61
MUC1-228ENST00000620103 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
MUC1-228ENST00000620103 LINC00476Q8WZB0 136 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms