RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 OR11H1Q8NG94 326 aa7.73□□□□□ -1.17
CDH23-213ENST00000619887 OR11H2Q8NH07 326 aa7.73□□□□□ -1.17
CDH23-213ENST00000619887 FLNBO75369 2602 aaKnown RBP7.72□□□□□ -1.17
CDH23-213ENST00000619887 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
CDH23-213ENST00000619887 IGHV3-73A0A0B4J1V6 119 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 JMJD8Q96S16 334 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 PEF1Q9UBV8 284 aaKnown RBP7.72□□□□□ -1.17
CDH23-213ENST00000619887 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 SNCGO76070 127 aa7.72□□□□□ -1.17
CDH23-213ENST00000619887 SRSF1Q07955 248 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDH23-213ENST00000619887 hDV102S1A0JD36 115 aa7.71□□□□□ -1.17
CDH23-213ENST00000619887 H7C1H1 209 aa7.71□□□□□ -1.17
CDH23-213ENST00000619887 J3QKU1 62 aa7.71□□□□□ -1.17
CDH23-213ENST00000619887 HLA-DMBP28068 263 aa7.71□□□□□ -1.17
CDH23-213ENST00000619887 UBE2E2Q96LR5 201 aa7.71□□□□□ -1.17
CDH23-213ENST00000619887 J3QLI3 93 aa7.71□□□□□ -1.18
CDH23-213ENST00000619887 SRSF2Q01130 221 aaKnown RBP7.71□□□□□ -1.18
CDH23-213ENST00000619887 ORMDL2Q53FV1 153 aa7.71□□□□□ -1.18
CDH23-213ENST00000619887 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.18
CDH23-213ENST00000619887 DUSP14O95147 198 aaKnown RBP7.71□□□□□ -1.18
CDH23-213ENST00000619887 IGLL1P15814 213 aa7.71□□□□□ -1.18
CDH23-213ENST00000619887 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 TNFRSF6BO95407 300 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 LGALS3P17931 250 aaKnown RBP7.7□□□□□ -1.18
CDH23-213ENST00000619887 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.7□□□□□ -1.18
CDH23-213ENST00000619887 CTRLP40313 264 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 ACANP16112 2415 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 LINC01549A6NIU2 74 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 DLEU1O43261 78 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 IGLV2-11P01706 119 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 RPL35AP18077 110 aaKnown RBP7.7□□□□□ -1.18
CDH23-213ENST00000619887 LAGE3Q14657 143 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 OR9G4Q8NGQ1 327 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 OR2K2Q8NGT1 345 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 DPH3P1Q9H4G8 78 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 DPM2O94777 84 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 MRAP2Q96G30 205 aa7.7□□□□□ -1.18
CDH23-213ENST00000619887 IGHV4-30-2A0A087WSY4 118 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 LGALS9BQ3B8N2 356 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 LGALS9CQ6DKI2 356 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 C16orf54Q6UWD8 224 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 DEFB131AP59861 70 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 ERASQ7Z444 233 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 SEC11AP67812 179 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 PAPPA-AS1Q5QFB9 102 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
CDH23-213ENST00000619887 MCRIP2Q9BUT9 160 aaKnown RBP7.69□□□□□ -1.18
CDH23-213ENST00000619887 ZNF747Q9BV97 191 aa7.69□□□□□ -1.18
CDH23-213ENST00000619887 C19orf84I3L1E1 186 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 NPYP01303 97 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 LINC00310P59036 64 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 TMEM95Q3KNT9 176 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 LYRM7Q5U5X0 104 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 BSNQ9UPA5 3926 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 IGHV7-4-1A0A0J9YVY3 117 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 PRSS57Q6UWY2 283 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 Q8N8P6 123 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 MEGF9Q9H1U4 602 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 IGHV4-59P01825 116 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 IGKCP01834 107 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 CCDC140Q96MF4 163 aa7.68□□□□□ -1.18
CDH23-213ENST00000619887 IGHG2P01859 326 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 TRGV4A0A0C4DH28 118 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 HSD52Q0P140 79 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 C9orf47Q6ZRZ4 202 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 GAGE10A6NGK3 116 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 C2orf70A6NJV1 201 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 ORAOV1Q8WV07 137 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 TMEM158Q8WZ71 300 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 MRPS12O15235 138 aaKnown RBP7.67□□□□□ -1.18
CDH23-213ENST00000619887 DEFB112Q30KQ8 113 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
CDH23-213ENST00000619887 A0A087WWL8 130 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 BLCAPP62952 87 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 GAGE1Q13065 139 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 SPINK13Q1W4C9 94 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 LINC01545Q5VT33 79 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 A6NJY4 79 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 KNCNA6PVL3 124 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 MPV17L2Q567V2 206 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 TRGV1A0A0A0MS02 117 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 A6NDX4 124 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 HOXA3O43365 443 aaPredicted RBP7.66□□□□□ -1.18
CDH23-213ENST00000619887 CIDEAO60543 219 aa7.66□□□□□ -1.18
CDH23-213ENST00000619887 IGF1P05019 195 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms