RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 OR2D3Q8NGH3 330 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 KCNS1Q96KK3 526 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 SSBP4Q9BWG4 385 aaPredicted RBP8.62□□□□□ -1.03
PDPN-211ENST00000617617 PRB4P10163 310 aaPredicted RBP8.61□□□□□ -1.03
PDPN-211ENST00000617617 NUTF2P61970 127 aaKnown RBP8.61□□□□□ -1.03
PDPN-211ENST00000617617 ZNF124Q15973 351 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 TRRAPQ9Y4A5 3859 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 A0A1B0GW15 77 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
PDPN-211ENST00000617617 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
PDPN-211ENST00000617617 NEU1Q99519 415 aa8.61□□□□□ -1.03
PDPN-211ENST00000617617 SNAI2O43623 268 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
PDPN-211ENST00000617617 SORL1Q92673 2214 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 KIR2DL5BA0A0G2JN68 375 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 KIR2DL5BA0A0G2JPC4 375 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 F2Z2F3 143 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 KIR2DL5AQ8N109 375 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 NUP35Q8NFH5 326 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
PDPN-211ENST00000617617 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 INSP01308 110 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 OR5AL1P0C617 328 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 SPINK13Q1W4C9 94 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 PTH2Q96A98 100 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 GIG44P09565 113 aaPredicted RBP8.59□□□□□ -1.03
PDPN-211ENST00000617617 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
PDPN-211ENST00000617617 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 M0R2Z0 102 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
PDPN-211ENST00000617617 ORM1P02763 201 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 FAM210BQ96KR6 192 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 SRD5A3Q9H8P0 318 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 NXPH4O95158 308 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 RAB5AP20339 215 aa8.58□□□□□ -1.04
PDPN-211ENST00000617617 FAM3BP58499 235 aaPredicted RBP8.58□□□□□ -1.04
PDPN-211ENST00000617617 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 RBMY1A1P0DJD3 496 aaKnown RBP8.57□□□□□ -1.04
PDPN-211ENST00000617617 RBMY1CP0DJD4 496 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 KRTAP10-11P60412 298 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 CACNG7P62955 275 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
PDPN-211ENST00000617617 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 SSTP61278 116 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 FAM159AQ6UWV7 190 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 DEFB125Q8N687 156 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
PDPN-211ENST00000617617 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 Q6ZQT7 251 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 WFDC10AQ9H1F0 79 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 URGCP-MRPS24S4R325 110 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 UBE2CO00762 179 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 MT-ND6P03923 174 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 S100A8P05109 93 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 ASIPP42127 132 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 NDUFAF3Q9BU61 184 aa8.56□□□□□ -1.04
PDPN-211ENST00000617617 LOC102724200A0A096LPH7 203 aaPredicted RBP8.55□□□□□ -1.04
PDPN-211ENST00000617617 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 RIGQ13278 110 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 ZNF705AQ6ZN79 300 aaPredicted RBP8.55□□□□□ -1.04
PDPN-211ENST00000617617 COL6A5A8TX70 2615 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 PHOX2AO14813 284 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 GZMBP10144 247 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
PDPN-211ENST00000617617 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
PDPN-211ENST00000617617 APOC4P55056 127 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 HBBP68871 147 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 BORCS7Q96B45 105 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 TCL1AP56279 114 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 GOLT1BQ9Y3E0 138 aa8.54□□□□□ -1.04
PDPN-211ENST00000617617 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
PDPN-211ENST00000617617 J3KRW8 73 aa8.53□□□□□ -1.04
PDPN-211ENST00000617617 MUC4Q99102 2169 aa8.53□□□□□ -1.04
PDPN-211ENST00000617617 HLA-DQA1P01909 254 aa8.53□□□□□ -1.04
PDPN-211ENST00000617617 FXYD7P58549 80 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms