RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 MLST8Q9BVC4 326 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 A8MWL6 223 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 IGLV2-8P01709 118 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 RAB5BP61020 215 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 COX19Q49B96 90 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 SMUG1Q53HV7 270 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 CT83Q5H943 113 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 NHLRC2Q8NBF2 726 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 SGK494Q96LW2 274 aa12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 TMA7Q9Y2S6 64 aaKnown RBP12.71□□□□□ -0.37
TRAPPC3-209ENST00000616395 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 ZNF138P52744 262 aa12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
TRAPPC3-209ENST00000616395 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 PFN1P07737 140 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 Q6ZTC4 211 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
TRAPPC3-209ENST00000616395 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 FAM3BP58499 235 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 FAM162BQ5T6X4 162 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 SAV1Q9H4B6 383 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 V9GYV3 84 aa12.68□□□□□ -0.38
TRAPPC3-209ENST00000616395 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 ZNF705FA8MVS1 300 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 SOCS3O14543 225 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 P0DMU3 169 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 CMC4P56277 68 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 Q8NAQ8 132 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 BORCS7Q96B45 105 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
TRAPPC3-209ENST00000616395 TRBV7-9A0A0J9YWB2 115 aa12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 Q6AWC8 147 aa12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
TRAPPC3-209ENST00000616395 TGIF2-C20orf24A0A0A6YYL0 155 aa12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 C16orf90A8MZG2 172 aa12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 Q8N1X5 172 aa12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 YPEL4Q96NS1 127 aa12.65□□□□□ -0.38
TRAPPC3-209ENST00000616395 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 K7EQG2 157 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 VGLL1Q99990 258 aa12.64□□□□□ -0.39
TRAPPC3-209ENST00000616395 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 AMBPP02760 352 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 TYMSP04818 313 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 S100A8P05109 93 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 Q6ZR54 194 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
TRAPPC3-209ENST00000616395 MT-ND6P03923 174 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 S100A6P06703 90 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 CXCL1P09341 107 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 TSPOP30536 169 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 ERCC8Q13216 396 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 319.3 ms