RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
FOXN3-219ENST00000615335 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 OTOGQ6ZRI0 2925 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 NPIPB5A8MRT5 1133 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 LY6LH3BQJ8 138 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 SLC25A5P05141 298 aaKnown RBP10.19□□□□□ -0.78
FOXN3-219ENST00000615335 SAA4P35542 130 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 ID1P41134 155 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 NDUFV3P56181 108 aaKnown RBP10.19□□□□□ -0.78
FOXN3-219ENST00000615335 FHL3Q13643 280 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV1-3A0A0C4DH29 117 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 C19orf71A6NCJ1 209 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 NPFFO15130 113 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV4-38-2P0DP08 117 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 GNG5P63218 68 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 MINOS1Q5TGZ0 78 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 BRD3OSQ6XYD6 125 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 MINOS1-NBL1R4GNA1 71 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 A0A096LNJ9 63 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV3-72A0A0B4J1Y9 119 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV1-69DA0A0B4J2H0 117 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 HBDP02042 147 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 ORM2P19652 201 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 RUSC1-AS1Q66K80 236 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 DLX4Q92988 240 aaPredicted RBP10.18□□□□□ -0.78
FOXN3-219ENST00000615335 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 RITA1Q96K30 269 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 MLST8Q9BVC4 326 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
FOXN3-219ENST00000615335 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 MOSP00540 346 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 MYCNOSP40205 109 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 RIGQ13278 110 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 MRGPRG-AS1Q2M3A8 158 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
FOXN3-219ENST00000615335 PGPA6NDG6 321 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 LTAP01374 205 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 KLF17Q5JT82 389 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-219ENST00000615335 Q6Q795 121 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 GLMPQ8WWB7 406 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 TRGV9Q99603 122 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
FOXN3-219ENST00000615335 TIMM23O14925 209 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 IFITM1P13164 125 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 RPL27AP46776 148 aaKnown RBP10.16□□□□□ -0.78
FOXN3-219ENST00000615335 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 DYNAPQ8N1N2 210 aa10.16□□□□□ -0.78
FOXN3-219ENST00000615335 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
FOXN3-219ENST00000615335 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
FOXN3-219ENST00000615335 PVRIGQ6DKI7 326 aa10.15□□□□□ -0.78
FOXN3-219ENST00000615335 FMC1Q96HJ9 113 aa10.15□□□□□ -0.78
FOXN3-219ENST00000615335 OOSP1A8MZH6 123 aa10.15□□□□□ -0.79
FOXN3-219ENST00000615335 LYRM7Q5U5X0 104 aa10.15□□□□□ -0.79
FOXN3-219ENST00000615335 AJUBAQ96IF1 538 aa10.15□□□□□ -0.79
FOXN3-219ENST00000615335 SGK494Q96LW2 274 aa10.15□□□□□ -0.79
FOXN3-219ENST00000615335 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
FOXN3-219ENST00000615335 IFI27P40305 119 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-219ENST00000615335 ASIPP42127 132 aa10.14□□□□□ -0.79
FOXN3-219ENST00000615335 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
FOXN3-219ENST00000615335 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
FOXN3-219ENST00000615335 APELAP0DMC3 54 aa10.14□□□□□ -0.79
FOXN3-219ENST00000615335 EVI2AP22794 236 aa10.14□□□□□ -0.79
FOXN3-219ENST00000615335 SMCPP49901 116 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-219ENST00000615335 IGHV3-21A0A0B4J1V1 117 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 LINC01619G3V211 115 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 SNCGO76070 127 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 HES1Q14469 280 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 CFHR4Q92496 578 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 PTH2Q96A98 100 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 CRYGBP07316 175 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 CNTFRP26992 372 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 TMEM158Q8WZ71 300 aa10.13□□□□□ -0.79
FOXN3-219ENST00000615335 MXRA5Q9NR99 2828 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 PF4V1P10720 104 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 GP9P14770 177 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 KRTAP1-1Q07627 177 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 LINC00322Q6ZN03 302 aaPredicted RBP10.12□□□□□ -0.79
FOXN3-219ENST00000615335 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
FOXN3-219ENST00000615335 Q9H3A6 140 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 SIGLEC9Q9Y336 463 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 IGKV2D-26A0A0A0MRZ7 120 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 IL4P05112 153 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 SMR3AQ99954 134 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
FOXN3-219ENST00000615335 H3BTX0 84 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 M0QXV9 152 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms