RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 IL17RELQ6ZVW7 336 aa11.25□□□□□ -0.61
CDH1-213ENST00000612417 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
CDH1-213ENST00000612417 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
CDH1-213ENST00000612417 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 A6NDX4 124 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 WFDC11Q8NEX6 87 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 SMKR1H3BMG3 65 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 SMAD7O15105 426 aaKnown RBP11.24□□□□□ -0.61
CDH1-213ENST00000612417 C2orf91Q6ZV80 131 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 Q6ZVH6 145 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 MAP1LC3AQ9H492 121 aa11.24□□□□□ -0.61
CDH1-213ENST00000612417 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 LINC00527Q9UJ94 153 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 FGF6P10767 208 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
CDH1-213ENST00000612417 TAX1BP3O14907 124 aa11.22□□□□□ -0.61
CDH1-213ENST00000612417 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
CDH1-213ENST00000612417 NXT2Q9NPJ8 142 aaKnown RBP11.22□□□□□ -0.61
CDH1-213ENST00000612417 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
CDH1-213ENST00000612417 PDZD2O15018 2839 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 J3KRW8 73 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 CACNG7P62955 275 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.61
CDH1-213ENST00000612417 FASNP49327 2511 aaKnown RBP11.21□□□□□ -0.61
CDH1-213ENST00000612417 UNC79Q9P2D8 2635 aa11.21□□□□□ -0.61
CDH1-213ENST00000612417 SAMD13Q5VXD3 122 aa11.21□□□□□ -0.62
CDH1-213ENST00000612417 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.62
CDH1-213ENST00000612417 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 TNFRSF6BO95407 300 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 BLCAPP62952 87 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 LENEPQ9Y5L5 61 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 FLNAP21333 2647 aaKnown RBP11.2□□□□□ -0.62
CDH1-213ENST00000612417 CD5LO43866 347 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 BRI3O95415 125 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
CDH1-213ENST00000612417 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
CDH1-213ENST00000612417 FCER1GP30273 86 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 FXYD7P58549 80 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 VAMP3Q15836 100 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 C9orf139Q6ZV77 190 aa11.19□□□□□ -0.62
CDH1-213ENST00000612417 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 GAS8-AS1O95177 125 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 FSHBP01225 129 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 IGF1P05019 195 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 HECTD1Q9ULT8 2610 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 SNAI2O43623 268 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 IGHG2P01859 326 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 SEC11AP67812 179 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
CDH1-213ENST00000612417 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
CDH1-213ENST00000612417 SIVA1O15304 175 aa11.17□□□□□ -0.62
CDH1-213ENST00000612417 TRGV3P03979 118 aa11.17□□□□□ -0.62
CDH1-213ENST00000612417 PPIFP30405 207 aaKnown RBP11.17□□□□□ -0.62
CDH1-213ENST00000612417 Q6ZS46 218 aa11.17□□□□□ -0.62
CDH1-213ENST00000612417 OR9G4Q8NGQ1 327 aa11.17□□□□□ -0.62
CDH1-213ENST00000612417 H3BUA1 57 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 NDUFA4O00483 81 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 ARL3P36405 182 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 Q8N8P6 123 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 FOXC2Q99958 501 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 LEPP41159 167 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 FOXE3Q13461 319 aa11.16□□□□□ -0.62
CDH1-213ENST00000612417 EVI2AP22794 236 aa11.15□□□□□ -0.62
CDH1-213ENST00000612417 RIPPLY3P57055 190 aa11.15□□□□□ -0.62
CDH1-213ENST00000612417 Q6YL49 198 aa11.15□□□□□ -0.62
CDH1-213ENST00000612417 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.62
CDH1-213ENST00000612417 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
CDH1-213ENST00000612417 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.62
CDH1-213ENST00000612417 ODF1Q14990 250 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 GPHB5Q86YW7 130 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 NRACQ8N912 160 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 USMG5Q96IX5 58 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 DKK2Q9UBU2 259 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.63
CDH1-213ENST00000612417 AKAP9Q99996 3911 aa11.14□□□□□ -0.63
CDH1-213ENST00000612417 G3V4G9 280 aa11.14□□□□□ -0.63
CDH1-213ENST00000612417 SOCS3O14543 225 aa11.14□□□□□ -0.63
CDH1-213ENST00000612417 GATA1P15976 413 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms