RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 Q6ZVH6 145 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 ARHGAP32A7KAX9 2087 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 DYSFO75923 2080 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 ATG2AQ2TAZ0 1938 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 IGHG2P01859 326 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 IGLC6P0CF74 106 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 SYNJ2BPP57105 145 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 FOXE3Q13461 319 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 MAPK1IP1LQ8NDC0 245 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 OR1N2Q8NGR9 330 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 COX11Q9Y6N1 276 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 CFAP46Q8IYW2 2715 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 H7C1H1 209 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 SMAD7O15105 426 aaKnown RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 NHP2Q9NX24 153 aaKnown RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 TEX29Q8N6K0 151 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 IGHV7-4-1A0A0J9YVY3 117 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 CRIP1P50238 77 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 FREM2Q5SZK8 3169 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 LINC01549A6NIU2 74 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 LOXL1Q08397 574 aaPredicted RBP4.91□□□□□ -1.62
SNX13-213ENST00000611725 AMMECR1LQ6DCA0 310 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 UNQ9165/PRO28630Q6UXU0 137 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 LINC01356Q8N9X3 169 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 ZFAND3Q9H8U3 227 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 CEP192Q8TEP8 1941 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 TRAV26-2A0A0B4J265 109 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
SNX13-213ENST00000611725 TMEM238LA0A1B0GVL6 79 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 A6NJY4 79 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 RNF223E7ERA6 249 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 IGHV4-59P01825 116 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 SMIM13P0DJ93 91 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 DEFB125Q8N687 156 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 MRAP2Q96G30 205 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 SPOCK3Q9BQ16 436 aa4.91□□□□□ -1.62
SNX13-213ENST00000611725 Q1RN00 199 aa4.9□□□□□ -1.62
SNX13-213ENST00000611725 TMEM95Q3KNT9 176 aa4.9□□□□□ -1.62
SNX13-213ENST00000611725 AJUBAQ96IF1 538 aa4.9□□□□□ -1.62
SNX13-213ENST00000611725 DKK2Q9UBU2 259 aa4.9□□□□□ -1.62
SNX13-213ENST00000611725 MRPS12O15235 138 aaKnown RBP4.9□□□□□ -1.62
SNX13-213ENST00000611725 JMJD8Q96S16 334 aa4.9□□□□□ -1.62
SNX13-213ENST00000611725 CD300EQ496F6 205 aaPredicted RBP4.9□□□□□ -1.63
SNX13-213ENST00000611725 LYRM7Q5U5X0 104 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 FRYLO94915 3013 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 IGF1P05019 195 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 DEFB112Q30KQ8 113 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 C16orf54Q6UWD8 224 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 Q71RC1 249 aaPredicted RBP4.9□□□□□ -1.63
SNX13-213ENST00000611725 BEX4Q9NWD9 120 aaPredicted RBP4.9□□□□□ -1.63
SNX13-213ENST00000611725 SPRY2O43597 315 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 PRSS2P07478 247 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 SCGB1C2P0DMR2 95 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 DEFB1P60022 68 aa4.9□□□□□ -1.63
SNX13-213ENST00000611725 A0A087WWL8 130 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 URB1-AS1Q96HZ7 61 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 ELANEP08246 267 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 BVES-AS1Q5T3Y7 98 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 IGHV3OR16-12A0A075B7B8 117 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 VCYO14598 125 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 F8W735 103 aaPredicted RBP4.89□□□□□ -1.63
SNX13-213ENST00000611725 PLNP26678 52 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 C21orf62-AS1Q17RA5 79 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 C9orf47Q6ZRZ4 202 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 NRGNQ92686 78 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
SNX13-213ENST00000611725 HCFC1P51610 2035 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 CHAC1Q9BUX1 264 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 TRGV11A0A075B6L2 103 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 TRBV12-3P01733 135 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 KIR3DS1Q14943 382 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 C20orf78Q9BR46 151 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 PEMTQ9UBM1 199 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 TP73-AS1Q9UF72 201 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 TNFRSF18Q9Y5U5 241 aa4.89□□□□□ -1.63
SNX13-213ENST00000611725 NCKAP5O14513 1909 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 COTL1Q14019 142 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 DUX3Q96PT4 197 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 ZNF815PA8K554 130 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 ZNF479Q96JC4 524 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 ADAMTS20P59510 1910 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 F8VRH5 84 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms