RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 DEFB1P60022 68 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 ERVFC1-1P60608 527 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 IGFL4Q6B9Z1 124 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 C9orf47Q6ZRZ4 202 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 PRNTQ86SH4 94 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 RNF182Q8N6D2 247 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 SAV1Q9H4B6 383 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-207ENST00000611426 IGHV4-4A0A075B6R2 117 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 C19orf71A6NCJ1 209 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 ZNF705FA8MVS1 300 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-207ENST00000611426 MGST1P10620 155 aaKnown RBP15.62■□□□□ 0.09
CBWD3-207ENST00000611426 C12orf74Q32Q52 190 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 CT83Q5H943 113 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 IBA57Q5T440 356 aaKnown RBP15.62■□□□□ 0.09
CBWD3-207ENST00000611426 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-207ENST00000611426 BTF3L4Q96K17 158 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 SGK494Q96LW2 274 aa15.62■□□□□ 0.09
CBWD3-207ENST00000611426 PRAC2D3DTV9 90 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 NPIPB6E9PJ23 425 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 S100PP25815 95 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 FXYD7P58549 80 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 FOXI2Q6ZQN5 318 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 NHLRC2Q8NBF2 726 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 C20orf173Q96LM9 149 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 IL36BQ9NZH7 164 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 LENEPQ9Y5L5 61 aa15.61■□□□□ 0.09
CBWD3-207ENST00000611426 DEFB131BA0A096LNP1 70 aa15.6■□□□□ 0.09
CBWD3-207ENST00000611426 KCNIP4Q6PIL6 250 aa15.6■□□□□ 0.09
CBWD3-207ENST00000611426 ZNF705AQ6ZN79 300 aaPredicted RBP15.6■□□□□ 0.09
CBWD3-207ENST00000611426 OR4B1Q8NGF8 309 aa15.6■□□□□ 0.09
CBWD3-207ENST00000611426 VGLL1Q99990 258 aa15.6■□□□□ 0.09
CBWD3-207ENST00000611426 RNASE7Q9H1E1 156 aaKnown RBP15.6■□□□□ 0.09
CBWD3-207ENST00000611426 HECTD4Q9Y4D8 3996 aa15.59■□□□□ 0.09
CBWD3-207ENST00000611426 RAB5AP20339 215 aa15.59■□□□□ 0.09
CBWD3-207ENST00000611426 NUDT10Q8NFP7 164 aa15.59■□□□□ 0.09
CBWD3-207ENST00000611426 NUDT11Q96G61 164 aa15.59■□□□□ 0.09
CBWD3-207ENST00000611426 NEU1Q99519 415 aa15.59■□□□□ 0.09
CBWD3-207ENST00000611426 IGHV3OR16-12A0A075B7B8 117 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 TRBV7-9A0A0J9YWB2 115 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 TYMSP04818 313 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 EBLN2Q6P2I7 272 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 ZC2HC1AQ96GY0 325 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 CLUHP3Q96NS8 147 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 URGCP-MRPS24S4R325 110 aa15.58■□□□□ 0.08
CBWD3-207ENST00000611426 SMIM9A6NGZ8 99 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 ZNF705DP0CH99 300 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-207ENST00000611426 ZNF705BP0CI00 300 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-207ENST00000611426 EMP1P54849 157 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 ZNF738Q8NE65 137 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 LINC00477Q96M19 166 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 NDFIP1Q9BT67 221 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 AGPAT4-IT1Q9H0P7 198 aa15.57■□□□□ 0.08
CBWD3-207ENST00000611426 SMIM27A0A1W2PRY6 76 aa15.56■□□□□ 0.08
CBWD3-207ENST00000611426 GATCO43716 136 aaKnown RBP15.56■□□□□ 0.08
CBWD3-207ENST00000611426 CXCL1P09341 107 aa15.56■□□□□ 0.08
CBWD3-207ENST00000611426 SPART-AS1P0CW21 52 aa15.56■□□□□ 0.08
CBWD3-207ENST00000611426 ZNF138P52744 262 aa15.56■□□□□ 0.08
CBWD3-207ENST00000611426 TGIF2-C20orf24A0A0A6YYL0 155 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 TMEM189A5PLL7 270 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 FAM231BA6NCW3 169 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 ZNF705GA8MUZ8 300 aaPredicted RBP15.55■□□□□ 0.08
CBWD3-207ENST00000611426 F6UB75 175 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 AMBPP02760 352 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 CT45A10P0DMU9 189 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 TMEM78Q5T7P6 136 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 FAM210BQ96KR6 192 aa15.55■□□□□ 0.08
CBWD3-207ENST00000611426 RPP21Q9H633 154 aaKnown RBP15.55■□□□□ 0.08
CBWD3-207ENST00000611426 P01737 135 aa15.54■□□□□ 0.08
CBWD3-207ENST00000611426 PRR27Q6MZM9 219 aa15.54■□□□□ 0.08
CBWD3-207ENST00000611426 OR8A1Q8NGG7 326 aa15.54■□□□□ 0.08
CBWD3-207ENST00000611426 NDUFAF3Q9BU61 184 aa15.54■□□□□ 0.08
CBWD3-207ENST00000611426 A0A0J9YX75 114 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 CRIP1P50238 77 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 OR10J6PQ8NGY7 276 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 Q8TAT8 98 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 TSKUQ8WUA8 353 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 DAZAP1Q96EP5 407 aaKnown RBP15.53■□□□□ 0.08
CBWD3-207ENST00000611426 C8orf49Q96NF6 230 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 GFRA4Q9GZZ7 299 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 GOLT1BQ9Y3E0 138 aa15.53■□□□□ 0.08
CBWD3-207ENST00000611426 ERCC8Q13216 396 aa15.52■□□□□ 0.08
CBWD3-207ENST00000611426 SMUG1Q53HV7 270 aa15.52■□□□□ 0.08
CBWD3-207ENST00000611426 FAM162BQ5T6X4 162 aa15.52■□□□□ 0.08
CBWD3-207ENST00000611426 FAM19A4Q96LR4 140 aa15.52■□□□□ 0.08
CBWD3-207ENST00000611426 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
CBWD3-207ENST00000611426 A8MWL6 223 aa15.51■□□□□ 0.07
CBWD3-207ENST00000611426 FAM3BP58499 235 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-207ENST00000611426 ODF3Q96PU9 254 aa15.51■□□□□ 0.07
CBWD3-207ENST00000611426 P0DMU3 169 aa15.5■□□□□ 0.07
CBWD3-207ENST00000611426 FAM231AP0DMU4 169 aa15.5■□□□□ 0.07
CBWD3-207ENST00000611426 FAM231CP0DMU5 169 aa15.5■□□□□ 0.07
CBWD3-207ENST00000611426 CRISP2P16562 243 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 FAM222AQ5U5X8 452 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 C1orf158Q8N1D5 194 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 DKK2Q9UBU2 259 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 TEX48A0A1B0GUV7 120 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 SH2D1AO60880 128 aa15.49■□□□□ 0.07
CBWD3-207ENST00000611426 PRB4P10163 310 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-207ENST00000611426 FOXA3P55318 350 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-207ENST00000611426 RPL19P84098 196 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms