RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
SNX20-205ENST00000610485 A0A096LPF7 62 aa8.92□□□□□ -0.98
SNX20-205ENST00000610485 TEX46H3BTG2 121 aa8.92□□□□□ -0.98
SNX20-205ENST00000610485 ESRGQ1W209 222 aa8.92□□□□□ -0.98
SNX20-205ENST00000610485 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
SNX20-205ENST00000610485 RAB24Q969Q5 203 aa8.92□□□□□ -0.98
SNX20-205ENST00000610485 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 CTXND1A0A1B0GTU2 59 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 GCHFRP30047 84 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 GNG5P63218 68 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 FAM159AQ6UWV7 190 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 C6orf223Q8N319 242 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 SFT2D1Q8WV19 159 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 MBD3L1Q8WWY6 194 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 TVP23CQ96ET8 276 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 Q9H8V8 135 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
SNX20-205ENST00000610485 MRPS16Q9Y3D3 137 aaKnown RBP8.91□□□□□ -0.98
SNX20-205ENST00000610485 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 A0A1B0GV50 99 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 SERTM2A0A1B0GWG4 89 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 IGHV3-53P01767 116 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 TMEM183BQ1AE95 376 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 TMEM183AQ8IXX5 376 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 SLC7A5P1Q8MH63 180 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 C5orf17Q8NAS9 161 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 SPXQ9BT56 116 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 MED9Q9NWA0 146 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 PRO0255Q9UI72 69 aa8.9□□□□□ -0.98
SNX20-205ENST00000610485 TRAV21A0A0B4J279 112 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 MAP1LC3B2A6NCE7 125 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 F6UZH7 168 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 PAX4O43316 350 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 CXorf1O96002 111 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 TCRAP04437 139 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 SLAQ13239 276 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 FHL2Q14192 279 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 TTC32Q5I0X7 151 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 COMMD7Q86VX2 200 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 LYPD6BQ8NI32 183 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 RASL10AQ92737 203 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 MAP1LC3BQ9GZQ8 125 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 TREM1Q9NP99 234 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 TMEM167BQ9NRX6 74 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 NAGKQ9UJ70 344 aa8.89□□□□□ -0.99
SNX20-205ENST00000610485 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 GGTLC3B5MD39 225 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 CRYBA4P53673 196 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
SNX20-205ENST00000610485 TNP2Q05952 138 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 IQCF2Q8IXL9 164 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
SNX20-205ENST00000610485 IGHV3-16A0A0C4DH30 117 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 GNRH2O43555 120 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 TYMSP04818 313 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 CCL20P78556 96 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 SGK494Q96LW2 274 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 EPDR1Q9UM22 224 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 HHLA3Q9XRX5 114 aa8.87□□□□□ -0.99
SNX20-205ENST00000610485 K7EQM0 130 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 IGLV2-11P01706 119 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
SNX20-205ENST00000610485 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 KCNS1Q96KK3 526 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 SDF2L1Q9HCN8 221 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 PSG8Q9UQ74 426 aa8.86□□□□□ -0.99
SNX20-205ENST00000610485 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 A0A1W2PRE2 83 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 RAB19A4D1S5 217 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 FBLL1A6NHQ2 334 aaKnown RBP8.85□□□□□ -0.99
SNX20-205ENST00000610485 M0R2P5 195 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 IFNA1P01562 189 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 SFTA3P0C7M3 94 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
SNX20-205ENST00000610485 PPT1P50897 306 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 ZNF80P51504 273 aaPredicted RBP8.85□□□□□ -0.99
SNX20-205ENST00000610485 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
SNX20-205ENST00000610485 CYB561D1Q8N8Q1 229 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 TMEM75Q8N9X5 138 aa8.85□□□□□ -0.99
SNX20-205ENST00000610485 FLI1Q01543 452 aaPredicted RBP8.84□□□□□ -0.99
SNX20-205ENST00000610485 PEA15Q15121 130 aa8.84□□□□□ -0.99
SNX20-205ENST00000610485 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
SNX20-205ENST00000610485 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
SNX20-205ENST00000610485 GNG13Q9P2W3 67 aa8.84□□□□□ -0.99
SNX20-205ENST00000610485 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
SNX20-205ENST00000610485 RBFOX3A6NFN3 312 aa8.83□□□□□ -1
SNX20-205ENST00000610485 SIVA1O15304 175 aa8.83□□□□□ -1
SNX20-205ENST00000610485 NXPH4O95158 308 aa8.83□□□□□ -1
SNX20-205ENST00000610485 GCGP01275 180 aa8.83□□□□□ -1
SNX20-205ENST00000610485 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
SNX20-205ENST00000610485 SMUG1Q53HV7 270 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms