RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 M0R2P5 195 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 ATP6V0CP27449 155 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 LINC00315P59091 139 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 SERF2P84101 59 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 LYPD5Q6UWN5 251 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 KCNS1Q96KK3 526 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 K7EQM0 130 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 ARPC5O15511 151 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 GNRH2O43555 120 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 ORM1P02763 201 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 SRIP30626 198 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
PRKN-208ENST00000610470 K7EQD1 137 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 TYMSP04818 313 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 GCHFRP30047 84 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
PRKN-208ENST00000610470 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 TMEM167BQ9NRX6 74 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
PRKN-208ENST00000610470 C9JCJ5 164 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 CXorf1O96002 111 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 TCRAP04437 139 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 GYPEP15421 78 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 Q6ZNX1 250 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
PRKN-208ENST00000610470 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
PRKN-208ENST00000610470 TRAV9-2A0A087WT02 112 aa11.86□□□□□ -0.51
PRKN-208ENST00000610470 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
PRKN-208ENST00000610470 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
PRKN-208ENST00000610470 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
PRKN-208ENST00000610470 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
PRKN-208ENST00000610470 ZFP69Q49AA0 526 aa11.85□□□□□ -0.51
PRKN-208ENST00000610470 Q6ZRN7 208 aaPredicted RBP11.85□□□□□ -0.51
PRKN-208ENST00000610470 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
PRKN-208ENST00000610470 LY96Q9Y6Y9 160 aa11.85□□□□□ -0.51
PRKN-208ENST00000610470 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 APOBP04114 4563 aaKnown RBP11.84□□□□□ -0.51
PRKN-208ENST00000610470 FBLL1A6NHQ2 334 aaKnown RBP11.84□□□□□ -0.51
PRKN-208ENST00000610470 TAAR5O14804 337 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 SH2D6Q7Z4S9 175 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 NFE4Q86UQ8 179 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
PRKN-208ENST00000610470 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 K7EP13 123 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 GCGP01275 180 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
PRKN-208ENST00000610470 KRTAP10-2P60368 255 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 FLI1Q01543 452 aaPredicted RBP11.83□□□□□ -0.52
PRKN-208ENST00000610470 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
PRKN-208ENST00000610470 hCG_2014768A0A024R1R8 64 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 A0A1W2PRE2 83 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 HMSDA8MTL9 139 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 EREGO14944 169 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 CIDEAO60543 219 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 EVI2AP22794 236 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
PRKN-208ENST00000610470 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
PRKN-208ENST00000610470 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
PRKN-208ENST00000610470 ERVFC1-1P60608 527 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 WFDC10BQ8IUB3 73 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 KCNRGQ8N5I3 272 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
PRKN-208ENST00000610470 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
PRKN-208ENST00000610470 ZNF345Q14585 488 aa11.8□□□□□ -0.52
PRKN-208ENST00000610470 MAPKAPK5-AS1Q8N8E1 139 aa11.8□□□□□ -0.52
PRKN-208ENST00000610470 NHLRC2Q8NBF2 726 aa11.8□□□□□ -0.52
PRKN-208ENST00000610470 LOC100131303A0A0U1RQF7 123 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 RS1O15537 224 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 DNAH10OSP0CZ25 163 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 PPT1P50897 306 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 TIRAPP58753 221 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 PTH2Q96A98 100 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 C9orf85Q96MD7 179 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 PRADC1Q9BSG0 188 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 TNFRSF18Q9Y5U5 241 aa11.79□□□□□ -0.52
PRKN-208ENST00000610470 A0A0D9SG52 128 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 IFNA7P01567 189 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 AKR1C8PQ5T2L2 129 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 C10orf126Q8N4M7 172 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 KRTAP4-5Q9BYR2 181 aa11.78□□□□□ -0.52
PRKN-208ENST00000610470 NKX6-2Q9C056 277 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms