RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 KISS1Q15726 138 aa4.31□□□□□ -1.72
LSM1P2-201ENST00000604911 LYPD5Q6UWN5 251 aa4.31□□□□□ -1.72
LSM1P2-201ENST00000604911 FGF22Q9HCT0 170 aa4.31□□□□□ -1.72
LSM1P2-201ENST00000604911 TAC3Q9UHF0 121 aa4.31□□□□□ -1.72
LSM1P2-201ENST00000604911 DOCK4Q8N1I0 1966 aa4.31□□□□□ -1.72
LSM1P2-201ENST00000604911 THSD7AQ9UPZ6 1657 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 TRAV7A0A075B6U4 112 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 TMEM14DPA8MWL7 114 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1-5P01602 117 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 CCL4P13236 92 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 PLNP26678 52 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 LINC00313P59037 77 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 RPS18P62269 152 aaKnown RBP4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 BLCAPP62952 87 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 PLGLAQ15195 96 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 FBXL19-AS1Q494R0 122 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 MRPL51Q4U2R6 128 aaKnown RBP4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 LINC00474Q9P2X8 69 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 RALGAPA2Q2PPJ7 1873 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 CEP350Q5VT06 3117 aa4.3□□□□□ -1.72
LSM1P2-201ENST00000604911 RALGAPA1Q6GYQ0 2036 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 TNRC6CQ9HCJ0 1690 aaKnown RBP4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 ANAPC1Q9H1A4 1944 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1D-8A0A087WSZ0 117 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 A0A087WZ39 114 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 EPOPA6NHQ4 379 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1D-33P01593 117 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1-33P01594 117 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 IGLV3-27P01718 113 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 TRBV12-3P01733 135 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 COX6CP09669 75 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 PIRTP0C851 137 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 IL9P15248 144 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 VMO1Q7Z5L0 202 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 LYPD6Q86Y78 171 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 FAM223AQ8IWN6 122 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 Q96M85 177 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 NABP2Q9BQ15 211 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 NPCDR1Q9BY65 106 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 TRPM6Q9BX84 2022 aa4.29□□□□□ -1.72
LSM1P2-201ENST00000604911 SNRNP200O75643 2136 aaKnown RBP4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 UBR3Q6ZT12 1888 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 BRWD3Q6RI45 1802 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 IGHV1OR21-1A0A087WYE8 117 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1D-13A0A0B4J2D9 117 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 CPSF4LA6NMK7 179 aaKnown RBP4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 LOC730098B7Z3J9 87 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 BUB1B-PAK6H3BSN5 160 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 SPINK4O60575 86 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 IGKV1-13P0DP09 117 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 LINC00205P59089 165 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 LPAL2Q16609 132 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 LINC01554Q52M75 96 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 CLLU1OSQ5K130 101 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 GDF5OSQ5U4N7 250 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 GPHB5Q86YW7 130 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 GREB1Q4ZG55 1949 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 PLXNB3Q9ULL4 1909 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 COL11A1P12107 1806 aaPredicted RBP4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 NUP98P52948 1817 aa4.28□□□□□ -1.72
LSM1P2-201ENST00000604911 KIAA2026Q5HYC2 2103 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 A0A087X002 238 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 IGKV2D-26A0A0A0MRZ7 120 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 IGHV1OR15-9A0A0B4J2B8 117 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 CFC1P0CG37 223 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 Q0VFX4 171 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 ASB16-AS1Q495Z4 193 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 ZNF818PQ6ZRF7 136 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 ZNF826PQ6ZT77 177 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 PSENENQ9NZ42 101 aa4.27□□□□□ -1.73
LSM1P2-201ENST00000604911 NCOA6Q14686 2063 aaPredicted RBP4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 IGLV3-32A0A0A0MS00 114 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 TMEM30CPA0ZSE6 113 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 A6NN06 94 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 H7C423 109 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 WNT9BO14905 357 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 IGHV3-33P01772 117 aa4.26□□□□□ -1.73
LSM1P2-201ENST00000604911 PRM2P04554 102 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms