RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SDF2L1Q9HCN8 221 aa9.87□□□□□ -0.83
RNF40-212ENST00000602784 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
RNF40-212ENST00000602784 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 ZNF674Q2M3X9 581 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 LGALS9BQ3B8N2 356 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 C11orf21Q9P2W6 132 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 NAGKQ9UJ70 344 aa9.86□□□□□ -0.83
RNF40-212ENST00000602784 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 TMEM250H0YL14 139 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 SPINK4O60575 86 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 DEFB130BP0DP73 79 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 DEFB130AP0DP74 79 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 CRIP1P50238 77 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 ZNF767PQ75MW2 155 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 C18orf15Q96N68 181 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 FAM210AQ96ND0 272 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 SPXQ9BT56 116 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
RNF40-212ENST00000602784 IGHV3-16A0A0C4DH30 117 aa9.84□□□□□ -0.83
RNF40-212ENST00000602784 GNRH2O43555 120 aa9.84□□□□□ -0.83
RNF40-212ENST00000602784 TYMSP04818 313 aa9.84□□□□□ -0.83
RNF40-212ENST00000602784 FAM210BQ96KR6 192 aa9.84□□□□□ -0.83
RNF40-212ENST00000602784 SH2D1AO60880 128 aa9.83□□□□□ -0.84
RNF40-212ENST00000602784 GNG4P50150 75 aa9.83□□□□□ -0.84
RNF40-212ENST00000602784 TCTAP57738 103 aa9.83□□□□□ -0.84
RNF40-212ENST00000602784 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
RNF40-212ENST00000602784 Q6ZTI0 123 aa9.83□□□□□ -0.84
RNF40-212ENST00000602784 EIF5A2Q9GZV4 153 aaKnown RBP9.83□□□□□ -0.84
RNF40-212ENST00000602784 TRGV1A0A0A0MS02 117 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 IGKV3D-20A0A0C4DH25 116 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 RAB19A4D1S5 217 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 ORM1P02763 201 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 ATP5G1P05496 136 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 TOR2AQ5JU69 321 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 DNLZQ5SXM8 178 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 NHLRC2Q8NBF2 726 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 RASL10AQ92737 203 aa9.82□□□□□ -0.84
RNF40-212ENST00000602784 GAGE12BA1L429 117 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 B4DEV8 164 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 C9JCJ5 164 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 GAGE7O76087 117 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 IGLV2-8P01709 118 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 LINC01559Q495D7 138 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 PTH2Q96A98 100 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 SMDT1Q9H4I9 107 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 BIN3Q9NQY0 253 aa9.81□□□□□ -0.84
RNF40-212ENST00000602784 TRBV20OR9-2A0A075B6H5 130 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 M0R2P5 195 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 RAB14P61106 215 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
RNF40-212ENST00000602784 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 NDUFAF3Q9BU61 184 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 PARLQ9H300 379 aa9.8□□□□□ -0.84
RNF40-212ENST00000602784 IGLL5B9A064 214 aa9.79□□□□□ -0.84
RNF40-212ENST00000602784 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
RNF40-212ENST00000602784 ASIPP42127 132 aa9.79□□□□□ -0.84
RNF40-212ENST00000602784 ZNF575Q86XF7 245 aa9.79□□□□□ -0.84
RNF40-212ENST00000602784 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
RNF40-212ENST00000602784 STARD9Q9P2P6 4700 aa9.79□□□□□ -0.84
RNF40-212ENST00000602784 DYNC2H1Q8NCM8 4307 aaKnown RBP9.78□□□□□ -0.84
RNF40-212ENST00000602784 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 M0R036 132 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 SRP19P09132 144 aaKnown RBP9.78□□□□□ -0.84
RNF40-212ENST00000602784 CXCL1P09341 107 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 HTN3P15516 51 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
RNF40-212ENST00000602784 PEA15Q15121 130 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 MRPL16Q9NX20 251 aaKnown RBP9.78□□□□□ -0.84
RNF40-212ENST00000602784 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
RNF40-212ENST00000602784 F5H768 121 aa9.77□□□□□ -0.85
RNF40-212ENST00000602784 MGST1P10620 155 aaKnown RBP9.77□□□□□ -0.85
RNF40-212ENST00000602784 IFITM2Q01629 132 aa9.77□□□□□ -0.85
RNF40-212ENST00000602784 PRR27Q6MZM9 219 aa9.77□□□□□ -0.85
RNF40-212ENST00000602784 LY96Q9Y6Y9 160 aa9.77□□□□□ -0.85
RNF40-212ENST00000602784 MUC4Q99102 2169 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 C19orf71A6NCJ1 209 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 PGPEP1LA6NFU8 196 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 MED14OSP0DP75 135 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 OR5I1Q13606 314 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 ZNF876PQ49A33 203 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 OCC1Q8TAD7 63 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
RNF40-212ENST00000602784 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
RNF40-212ENST00000602784 H3BNG1 76 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 CIDEAO60543 219 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 CEBPGP53567 150 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 SLAQ13239 276 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 FAM74A3Q4VXF1 159 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms