RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	FBLL1	A6NHQ2	334 aa	Known RBP	11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	RS1	O15537	224 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	TYMS	P04818	313 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	OR10J4	P0C629	311 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	RHOH	Q15669	191 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	STX12	Q86Y82	276 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190		Q8N3U1	123 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	CIRBP-AS1	Q8TBR5	109 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	GTSF1L	Q9H1H1	148 aa		11.98	□□□□□ -0.49
IRF3-231	ENST00000602190	TRAV8-3	A0A0A6YYJ7	113 aa		11.97	□□□□□ -0.49
IRF3-231	ENST00000602190	PVALB	P20472	110 aa	Predicted RBP	11.97	□□□□□ -0.49
IRF3-231	ENST00000602190	SPANXN2	Q5MJ10	180 aa		11.97	□□□□□ -0.49
IRF3-231	ENST00000602190	CFAP126	Q5VTH2	177 aa		11.97	□□□□□ -0.49
IRF3-231	ENST00000602190	DPPA3	Q6W0C5	159 aa		11.97	□□□□□ -0.49
IRF3-231	ENST00000602190	IGLV2-8	P01709	118 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	CSN1S1	P47710	185 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	RAB32	Q13637	225 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	LINC01620	Q4KN68	170 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	TRIQK	Q629K1	86 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	ARL6IP6	Q8N6S5	226 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	PTH2	Q96A98	100 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	TVP23C	Q96ET8	276 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	PRADC1	Q9BSG0	188 aa		11.96	□□□□□ -0.49
IRF3-231	ENST00000602190	RNF222	A6NCQ9	220 aa		11.95	□□□□□ -0.5
IRF3-231	ENST00000602190	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.94	□□□□□ -0.5
IRF3-231	ENST00000602190	TRAV21	A0A0B4J279	112 aa		11.94	□□□□□ -0.5
IRF3-231	ENST00000602190	LECT2	O14960	151 aa		11.94	□□□□□ -0.5
IRF3-231	ENST00000602190	RAN	P62826	216 aa	Known RBP	11.94	□□□□□ -0.5
IRF3-231	ENST00000602190	ATP6V0E2	Q8NHE4	81 aa		11.94	□□□□□ -0.5
IRF3-231	ENST00000602190	C5orf51	A6NDU8	294 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	CENPX	A8MT69	81 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	PLA2G10	O15496	165 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	MT1HL1	P0DM35	61 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	INPP1	P49441	399 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	THAP6	Q8TBB0	222 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	KCNS1	Q96KK3	526 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	C9orf85	Q96MD7	179 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	RBM38	Q9H0Z9	239 aa	Known RBP	11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	NAGK	Q9UJ70	344 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	COX11	Q9Y6N1	276 aa		11.93	□□□□□ -0.5
IRF3-231	ENST00000602190	FAM25E	A8MYX2	175 aa		11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	MGST1	P10620	155 aa	Known RBP	11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	IL7	P13232	177 aa		11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	NHLH2	Q02577	135 aa		11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	DAZ4	Q86SG3	579 aa	Known RBP	11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	BAALC	Q8WXS3	180 aa		11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	WDR61	Q9GZS3	305 aa	Known RBP	11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	SDF2L1	Q9HCN8	221 aa		11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	DAZ3	Q9NR90	486 aa	Known RBP	11.92	□□□□□ -0.5
IRF3-231	ENST00000602190	OR7C2	O60412	319 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	IGLV2-11	P01706	119 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	HNRNPA3	P51991	378 aa	Known RBP	11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	UBE2L3	P68036	154 aa	Known RBP	11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	ZNF876P	Q49A33	203 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	TOR2A	Q5JU69	321 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	OR5C1	Q8NGR4	320 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	SEC22C	Q9BRL7	303 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	KCNIP2	Q9NS61	270 aa		11.91	□□□□□ -0.5
IRF3-231	ENST00000602190	TCRB	P04435	133 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	S100A10	P60903	97 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	ATRAID	Q6UW56	229 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190		Q8N976	141 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	ATP5S	Q99766	215 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	OTOR	Q9NRC9	128 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	C11orf21	Q9P2W6	132 aa		11.9	□□□□□ -0.5
IRF3-231	ENST00000602190	ASB13	Q8WXK3	278 aa		11.89	□□□□□ -0.51
IRF3-231	ENST00000602190	DAZAP1	Q96EP5	407 aa	Known RBP	11.89	□□□□□ -0.51
IRF3-231	ENST00000602190	SH3BGRL3	Q9H299	93 aa		11.89	□□□□□ -0.51
IRF3-231	ENST00000602190		F6UZH7	168 aa		11.88	□□□□□ -0.51
IRF3-231	ENST00000602190	ZNF506	Q5JVG8	444 aa		11.88	□□□□□ -0.51
IRF3-231	ENST00000602190	LINC00479	Q96M42	142 aa		11.88	□□□□□ -0.51
IRF3-231	ENST00000602190	LRP2	P98164	4655 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	RBFOX3	A6NFN3	312 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	PGPEP1L	A6NFU8	196 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	GGTLC3	B5MD39	225 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	LYRM1	O43325	122 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	KHDC3L	Q587J8	217 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	PIK3CD-AS1	Q5SR53	167 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	ZFP2	Q6ZN57	461 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	TREM1	Q9NP99	234 aa		11.87	□□□□□ -0.51
IRF3-231	ENST00000602190	TRAV8-1	A0A0A6YYK1	113 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	RNASE3	P12724	160 aa	Known RBP	11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	ZNF80	P51504	273 aa	Predicted RBP	11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	UFSP1	Q6NVU6	142 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	GOLT1A	Q6ZVE7	132 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	DNAJC30	Q96LL9	226 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190	NUDT15	Q9NV35	164 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190		Q9UF83	564 aa		11.86	□□□□□ -0.51
IRF3-231	ENST00000602190		A0A087WWC5	75 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	IGHV3-73	A0A0B4J1V6	119 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	PGP	A6NDG6	321 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	NIT1	Q86X76	327 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	CYB561D1	Q8N8Q1	229 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	RMI2	Q96E14	147 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	PARL	Q9H300	379 aa		11.85	□□□□□ -0.51
IRF3-231	ENST00000602190	TRAV6	A0A075B6T7	132 aa		11.84	□□□□□ -0.51
IRF3-231	ENST00000602190		H0YIZ8	118 aa		11.84	□□□□□ -0.51
IRF3-231	ENST00000602190	C17orf112	F2Z3M2	114 aa		11.83	□□□□□ -0.52
IRF3-231	ENST00000602190	TAS2R45	P59539	299 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 101 ms