RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 GNRH2O43555 120 aa17.94■□□□□ 0.46
PNKP-216ENST00000601816 SDF2L1Q9HCN8 221 aa17.94■□□□□ 0.46
PNKP-216ENST00000601816 IGHV3-16A0A0C4DH30 117 aa17.93■□□□□ 0.46
PNKP-216ENST00000601816 SFTA3P0C7M3 94 aa17.93■□□□□ 0.46
PNKP-216ENST00000601816 IQCF2Q8IXL9 164 aa17.93■□□□□ 0.46
PNKP-216ENST00000601816 ZNF479Q96JC4 524 aa17.93■□□□□ 0.46
PNKP-216ENST00000601816 KCNS1Q96KK3 526 aa17.93■□□□□ 0.46
PNKP-216ENST00000601816 GGTLC3B5MD39 225 aa17.92■□□□□ 0.46
PNKP-216ENST00000601816 TYMSP04818 313 aa17.92■□□□□ 0.46
PNKP-216ENST00000601816 SUMO1P63165 101 aaKnown RBP17.92■□□□□ 0.46
PNKP-216ENST00000601816 MRPL23Q16540 153 aaKnown RBP17.92■□□□□ 0.46
PNKP-216ENST00000601816 ZNF575Q86XF7 245 aa17.92■□□□□ 0.46
PNKP-216ENST00000601816 M0R2P5 195 aa17.91■□□□□ 0.46
PNKP-216ENST00000601816 EPDR1Q9UM22 224 aa17.91■□□□□ 0.46
PNKP-216ENST00000601816 PSG8Q9UQ74 426 aa17.91■□□□□ 0.46
PNKP-216ENST00000601816 TRAV4A0A0B4J268 109 aa17.89■□□□□ 0.45
PNKP-216ENST00000601816 NXPH4O95158 308 aa17.89■□□□□ 0.45
PNKP-216ENST00000601816 CYB561D1Q8N8Q1 229 aa17.89■□□□□ 0.45
PNKP-216ENST00000601816 PCNPQ8WW12 178 aaKnown RBP17.89■□□□□ 0.45
PNKP-216ENST00000601816 CTXND1A0A1B0GTU2 59 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 G3V3Q6 166 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 SIVA1O15304 175 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 BTF3P20290 206 aaKnown RBP17.88■□□□□ 0.45
PNKP-216ENST00000601816 FLI1Q01543 452 aaPredicted RBP17.88■□□□□ 0.45
PNKP-216ENST00000601816 ZNF726P1Q15940 193 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 NEGR1Q7Z3B1 354 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 OR4C5Q8NGB2 326 aa17.88■□□□□ 0.45
PNKP-216ENST00000601816 A0A1W2PRE2 83 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 FBLL1A6NHQ2 334 aaKnown RBP17.87■□□□□ 0.45
PNKP-216ENST00000601816 GCGP01275 180 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 IGLV2-11P01706 119 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 ZNF80P51504 273 aaPredicted RBP17.87■□□□□ 0.45
PNKP-216ENST00000601816 ZFP69Q49AA0 526 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 AKR1C8PQ5T2L2 129 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 PRNTQ86SH4 94 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 TMEM75Q8N9X5 138 aa17.87■□□□□ 0.45
PNKP-216ENST00000601816 TAAR5O14804 337 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 ARPC5O15511 151 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 ORM1P02763 201 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 GYPEP15421 78 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 SRIP30626 198 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 SMUG1Q53HV7 270 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 LYPD5Q6UWN5 251 aa17.86■□□□□ 0.45
PNKP-216ENST00000601816 C16orf90A8MZG2 172 aa17.85■□□□□ 0.45
PNKP-216ENST00000601816 K7EQD1 137 aa17.85■□□□□ 0.45
PNKP-216ENST00000601816 C11orf21Q9P2W6 132 aa17.85■□□□□ 0.45
PNKP-216ENST00000601816 PFN1P07737 140 aaKnown RBP17.84■□□□□ 0.45
PNKP-216ENST00000601816 SAPCD1Q5SSQ6 148 aa17.84■□□□□ 0.45
PNKP-216ENST00000601816 C9JCJ5 164 aa17.83■□□□□ 0.44
PNKP-216ENST00000601816 IFNA7P01567 189 aa17.83■□□□□ 0.44
PNKP-216ENST00000601816 LINC00315P59091 139 aa17.83■□□□□ 0.44
PNKP-216ENST00000601816 UBE2G2P60604 165 aa17.83■□□□□ 0.44
PNKP-216ENST00000601816 FGF8P55075 233 aaPredicted RBP17.82■□□□□ 0.44
PNKP-216ENST00000601816 TXNDC17Q9BRA2 123 aa17.82■□□□□ 0.44
PNKP-216ENST00000601816 PPT1P50897 306 aa17.81■□□□□ 0.44
PNKP-216ENST00000601816 ZNF876PQ49A33 203 aa17.81■□□□□ 0.44
PNKP-216ENST00000601816 CYTL1Q9NRR1 136 aa17.81■□□□□ 0.44
PNKP-216ENST00000601816 TRAV34A0A0B4J273 112 aa17.8■□□□□ 0.44
PNKP-216ENST00000601816 LINC00479Q96M42 142 aa17.8■□□□□ 0.44
PNKP-216ENST00000601816 KRTAP17-1Q9BYP8 105 aa17.8■□□□□ 0.44
PNKP-216ENST00000601816 SMLR1H3BR10 107 aa17.79■□□□□ 0.44
PNKP-216ENST00000601816 PEX7O00628 323 aa17.79■□□□□ 0.44
PNKP-216ENST00000601816 C9orf85Q96MD7 179 aa17.79■□□□□ 0.44
PNKP-216ENST00000601816 NKX6-2Q9C056 277 aaPredicted RBP17.79■□□□□ 0.44
PNKP-216ENST00000601816 MAP1LC3B2A6NCE7 125 aa17.78■□□□□ 0.44
PNKP-216ENST00000601816 FAM74A7A6NL05 159 aa17.78■□□□□ 0.44
PNKP-216ENST00000601816 GATA1P15976 413 aaPredicted RBP17.78■□□□□ 0.44
PNKP-216ENST00000601816 SPATA12Q7Z6I5 190 aa17.78■□□□□ 0.44
PNKP-216ENST00000601816 MAP1LC3BQ9GZQ8 125 aa17.78■□□□□ 0.44
PNKP-216ENST00000601816 ARL2-SNX15V9GYD0 113 aa17.78■□□□□ 0.44
PNKP-216ENST00000601816 LOC100131303A0A0U1RQF7 123 aa17.77■□□□□ 0.44
PNKP-216ENST00000601816 SH2D6Q7Z4S9 175 aa17.76■□□□□ 0.43
PNKP-216ENST00000601816 Q86TA4 180 aa17.76■□□□□ 0.43
PNKP-216ENST00000601816 HIST1H2BAQ96A08 127 aa17.76■□□□□ 0.43
PNKP-216ENST00000601816 LY96Q9Y6Y9 160 aa17.76■□□□□ 0.43
PNKP-216ENST00000601816 TRAV9-2A0A087WT02 112 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 RS1O15537 224 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 CIDEAO60543 219 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 CFAP126Q5VTH2 177 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 Q6ZRN7 208 aaPredicted RBP17.75■□□□□ 0.43
PNKP-216ENST00000601816 WFDC10BQ8IUB3 73 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 NHLRC2Q8NBF2 726 aa17.75■□□□□ 0.43
PNKP-216ENST00000601816 RNASE3P12724 160 aaKnown RBP17.74■□□□□ 0.43
PNKP-216ENST00000601816 ZNF506Q5JVG8 444 aa17.74■□□□□ 0.43
PNKP-216ENST00000601816 DPPA3Q6W0C5 159 aa17.74■□□□□ 0.43
PNKP-216ENST00000601816 KCNRGQ8N5I3 272 aa17.74■□□□□ 0.43
PNKP-216ENST00000601816 STOML3Q8TAV4 291 aa17.74■□□□□ 0.43
PNKP-216ENST00000601816 PTH2Q96A98 100 aa17.74■□□□□ 0.43
PNKP-216ENST00000601816 PGPEP1LA6NFU8 196 aa17.73■□□□□ 0.43
PNKP-216ENST00000601816 FABP5P3A8MUU1 101 aa17.73■□□□□ 0.43
PNKP-216ENST00000601816 ZNF345Q14585 488 aa17.73■□□□□ 0.43
PNKP-216ENST00000601816 RYR1P21817 5038 aa17.72■□□□□ 0.43
PNKP-216ENST00000601816 IGKV3D-20A0A0C4DH25 116 aa17.72■□□□□ 0.43
PNKP-216ENST00000601816 S100A4P26447 101 aaKnown RBP17.72■□□□□ 0.43
PNKP-216ENST00000601816 SLC25A29Q8N8R3 303 aa17.72■□□□□ 0.43
PNKP-216ENST00000601816 PRADC1Q9BSG0 188 aa17.72■□□□□ 0.43
PNKP-216ENST00000601816 IGHV3-73A0A0B4J1V6 119 aa17.71■□□□□ 0.43
PNKP-216ENST00000601816 K7EP13 123 aa17.71■□□□□ 0.43
PNKP-216ENST00000601816 EVI2AP22794 236 aa17.71■□□□□ 0.43
PNKP-216ENST00000601816 RHOHQ15669 191 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 359.3 ms