RNA–Protein interactions for RNA: ENST00000601252.1

TIMM50-215, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 5

Gene TIMM50, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-215	ENST00000601252	OR1N2	Q8NGR9	330 aa		10.85	□□□□□ -0.67
TIMM50-215	ENST00000601252	IGHV4-4	A0A075B6R2	117 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	TMEM238L	A0A1B0GVL6	79 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	IGHV3-11	P01762	117 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	PRR31	Q5SQ13	230 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	LINC00173	Q6ZV60	143 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	ZNF738	Q8NE65	137 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	POLQ	O75417	2590 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	LOC389332	A0A1B0GUA5	103 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	G0S2	P27469	103 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	TMEM95	Q3KNT9	176 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	UNQ9165/PRO28630	Q6UXU0	137 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	SCRT2	Q9NQ03	307 aa		10.84	□□□□□ -0.67
TIMM50-215	ENST00000601252	CREBBP	Q92793	2442 aa		10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	IGHV3OR16-13	A0A075B7E8	117 aa		10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	IGHV3-49	A0A0A0MS15	119 aa		10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	IGHV3-74	A0A0B4J1X5	117 aa		10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	SNAI2	O43623	268 aa		10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	PEF1	Q9UBV8	284 aa	Known RBP	10.83	□□□□□ -0.68
TIMM50-215	ENST00000601252	NOTCH2	Q04721	2471 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	TRAV21	A0A0B4J279	112 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	NPY	P01303	97 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	MED14OS	P0DP75	135 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	DEFB125	Q8N687	156 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	RNF185	Q96GF1	192 aa		10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.82	□□□□□ -0.68
TIMM50-215	ENST00000601252	IGKV3D-20	A0A0C4DH25	116 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	PRSS47	A8MTI9	375 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252		K7EMT4	169 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	OR8A1	Q8NGG7	326 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	ORAOV1	Q8WV07	137 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	IFI27L1	Q96BM0	104 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	DAZ1	Q9NQZ3	744 aa	Known RBP	10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252		A0A096LNJ9	63 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	hDV102S1	A0JD36	115 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252		H0Y8G0	127 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	HOXA3	O43365	443 aa	Predicted RBP	10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	TNFRSF6B	O95407	300 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	ELANE	P08246	267 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	COX8A	P10176	69 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	FAM106A	Q4KMX7	169 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	SPANXN1	Q5VSR9	72 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	LCNL1	Q6ZST4	164 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	MRAP2	Q96G30	205 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	ZNF702P	Q9H963	129 aa		10.81	□□□□□ -0.68
TIMM50-215	ENST00000601252	IGHV7-4-1	A0A0J9YVY3	117 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	SMAD7	O15105	426 aa	Known RBP	10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	PRB4	P10163	310 aa	Predicted RBP	10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	FCER1G	P30273	86 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	ID1	P41134	155 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	HINT1	P49773	126 aa	Predicted RBP	10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	FOXE3	Q13461	319 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	GPHB5	Q86YW7	130 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252		Q8N8P6	123 aa		10.8	□□□□□ -0.68
TIMM50-215	ENST00000601252	SOCS3	O14543	225 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	CDKN1B	P46527	198 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	ZNF575	Q86XF7	245 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	STPG4	Q8N801	248 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	MYOZ3	Q8TDC0	251 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	SMPX	Q9UHP9	88 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	AKAP9	Q99996	3911 aa		10.79	□□□□□ -0.68
TIMM50-215	ENST00000601252	MUC21	A0A0G2JKD1	596 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	MUC21	A0A140T8X8	626 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252		K7EMI3	77 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	MUC21	Q5SSG8	566 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	TMEM86B	Q8N661	226 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	UFC1	Q9Y3C8	167 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	ATP5L	O75964	103 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	NCR2	O95944	276 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	PPP1R17	O96001	155 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	ASIP	P42127	132 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252		Q8N2B8	174 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	RNF152	Q8N8N0	203 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	WFDC11	Q8NEX6	87 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	OR2K2	Q8NGT1	345 aa		10.78	□□□□□ -0.68
TIMM50-215	ENST00000601252	MAP1A	P78559	2803 aa	Predicted RBP	10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	APRG1	Q8IVJ8	170 aa		10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	OR9G4	Q8NGQ1	327 aa		10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	RHPN1-AS1	Q9BWJ2	59 aa		10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	MSRB1	Q9NZV6	116 aa		10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	OTOG	Q6ZRI0	2925 aa		10.77	□□□□□ -0.69
TIMM50-215	ENST00000601252	SMKR1	H3BMG3	65 aa		10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	SIVA1	O15304	175 aa		10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	LGALS1	P09382	135 aa	Known RBP	10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	NPS	P0C0P6	89 aa		10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	S100A4	P26447	101 aa	Known RBP	10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	RPL11	P62913	178 aa	Known RBP	10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	COX11	Q9Y6N1	276 aa		10.76	□□□□□ -0.69
TIMM50-215	ENST00000601252	ZAN	Q9Y493	2812 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	LEP	P41159	167 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	TFPI2	P48307	235 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	RBX1	P62877	108 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	TM4SF20	Q53R12	229 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	C10orf99	Q6UWK7	81 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	ZFAND2A	Q8N6M9	145 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	FAM19A4	Q96LR4	140 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	UBE2E2	Q96LR5	201 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	C11orf21	Q9P2W6	132 aa		10.75	□□□□□ -0.69
TIMM50-215	ENST00000601252	C20orf173	Q96LM9	149 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms