RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CRYGDP07320 174 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 TAS2R45P59539 299 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 Q5VSD8 79 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 MARVELD1Q9BSK0 173 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 NAGKQ9UJ70 344 aa12.09□□□□□ -0.47
CHMP2A-208ENST00000601220 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 GATA1P15976 413 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 GCSHP23434 173 aa12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 GOLT1AQ6ZVE7 132 aa12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 SMIM3Q9BZL3 60 aa12.08□□□□□ -0.48
CHMP2A-208ENST00000601220 TRAV21A0A0B4J279 112 aa12.07□□□□□ -0.48
CHMP2A-208ENST00000601220 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
CHMP2A-208ENST00000601220 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
CHMP2A-208ENST00000601220 F6UZH7 168 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 PQLC2Q6ZP29 291 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 CMTM2Q8TAZ6 248 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 TREM1Q9NP99 234 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 RPH3ALQ9UNE2 315 aa12.06□□□□□ -0.48
CHMP2A-208ENST00000601220 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 GNG5P63218 68 aa12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 LINC01556Q5JQF7 62 aa12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 DPPA3Q6W0C5 159 aa12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 DMBT1Q9UGM3 2413 aaPredicted RBP12.05□□□□□ -0.48
CHMP2A-208ENST00000601220 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 ZNF80P51504 273 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 RAB2AP61019 212 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 ACOT6Q3I5F7 207 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 FAM74A1Q5RGS3 127 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 FRZBQ92765 325 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 SDF2L1Q9HCN8 221 aa12.04□□□□□ -0.48
CHMP2A-208ENST00000601220 RS1O15537 224 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 PET100P0DJ07 73 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 ASB13Q8WXK3 278 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 SGK494Q96LW2 274 aa12.03□□□□□ -0.48
CHMP2A-208ENST00000601220 FBLL1A6NHQ2 334 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 HAMPP81172 84 aa12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 NHLRC2Q8NBF2 726 aa12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 SUN5Q8TC36 379 aa12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 SRRM2Q9UQ35 2752 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-208ENST00000601220 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 SSNA1O43805 119 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 IGLV2-11P01706 119 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 PPT1P50897 306 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 OR10G9Q8NGN4 311 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 NTN5Q8WTR8 489 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
CHMP2A-208ENST00000601220 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 CIDEAO60543 219 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 STAG3L2P0CL84 134 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 STAG3L3P0CL85 134 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 PTH2Q96A98 100 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
CHMP2A-208ENST00000601220 TCRAP04437 139 aa11.99□□□□□ -0.49
CHMP2A-208ENST00000601220 ARL14EPLP0DKL9 152 aa11.99□□□□□ -0.49
CHMP2A-208ENST00000601220 Q8N814 137 aa11.99□□□□□ -0.49
CHMP2A-208ENST00000601220 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
CHMP2A-208ENST00000601220 IGHV3-73A0A0B4J1V6 119 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 TRAV8-6A0A0B4J262 113 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 PGPEP1LA6NFU8 196 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 A6NHS1 94 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 PSCAO43653 123 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 RHOHQ15669 191 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 LELP1Q5T871 98 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 Q6ZSN1 163 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 TMEM75Q8N9X5 138 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 OR2G3Q8NGZ4 309 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 PRADC1Q9BSG0 188 aa11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 FLG2Q5D862 2391 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-208ENST00000601220 TAAR5O14804 337 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 C5orf17Q8NAS9 161 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
CHMP2A-208ENST00000601220 GCGP01275 180 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 IGHV3-33P01772 117 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 GCHFRP30047 84 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 CDC34P49427 236 aaPredicted RBP11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 RAB24Q969Q5 203 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 Q9HAA7 133 aa11.96□□□□□ -0.49
CHMP2A-208ENST00000601220 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms