RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SLC25A29Q8N8R3 303 aa11.06□□□□□ -0.64
USE1-208ENST00000600970 CENPXA8MT69 81 aa11.05□□□□□ -0.64
USE1-208ENST00000600970 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
USE1-208ENST00000600970 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
USE1-208ENST00000600970 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
USE1-208ENST00000600970 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
USE1-208ENST00000600970 TYMSP04818 313 aa11.04□□□□□ -0.64
USE1-208ENST00000600970 S100A10P60903 97 aa11.04□□□□□ -0.64
USE1-208ENST00000600970 CNPY1Q3B7I2 92 aa11.04□□□□□ -0.64
USE1-208ENST00000600970 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
USE1-208ENST00000600970 PRADC1Q9BSG0 188 aa11.04□□□□□ -0.64
USE1-208ENST00000600970 RAB32Q13637 225 aa11.03□□□□□ -0.64
USE1-208ENST00000600970 Q8N3U1 123 aa11.03□□□□□ -0.64
USE1-208ENST00000600970 THAP6Q8TBB0 222 aa11.03□□□□□ -0.64
USE1-208ENST00000600970 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
USE1-208ENST00000600970 IL15RAQ13261 267 aa11.02□□□□□ -0.65
USE1-208ENST00000600970 RHOHQ15669 191 aa11.02□□□□□ -0.65
USE1-208ENST00000600970 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
USE1-208ENST00000600970 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
USE1-208ENST00000600970 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 TRAV8-3A0A0A6YYJ7 113 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 RS1O15537 224 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 OR7C2O60412 319 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 CFAP126Q5VTH2 177 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 BAALCQ8WXS3 180 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 SEC22CQ9BRL7 303 aa11.01□□□□□ -0.65
USE1-208ENST00000600970 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
USE1-208ENST00000600970 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
USE1-208ENST00000600970 CIDEAO60543 219 aa11□□□□□ -0.65
USE1-208ENST00000600970 NHLH2Q02577 135 aa11□□□□□ -0.65
USE1-208ENST00000600970 ASAH1Q13510 395 aa11□□□□□ -0.65
USE1-208ENST00000600970 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
USE1-208ENST00000600970 SDF2L1Q9HCN8 221 aa11□□□□□ -0.65
USE1-208ENST00000600970 RBFOX3A6NFN3 312 aa10.99□□□□□ -0.65
USE1-208ENST00000600970 UBE2L3P68036 154 aaKnown RBP10.99□□□□□ -0.65
USE1-208ENST00000600970 ZNF876PQ49A33 203 aa10.99□□□□□ -0.65
USE1-208ENST00000600970 DAZ4Q86SG3 579 aaKnown RBP10.99□□□□□ -0.65
USE1-208ENST00000600970 OR5C1Q8NGR4 320 aa10.99□□□□□ -0.65
USE1-208ENST00000600970 HYLS1Q96M11 299 aa10.99□□□□□ -0.65
USE1-208ENST00000600970 ATP5SQ99766 215 aa10.99□□□□□ -0.65
USE1-208ENST00000600970 DAZ3Q9NR90 486 aaKnown RBP10.99□□□□□ -0.65
USE1-208ENST00000600970 TRAV6A0A075B6T7 132 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 CCDC160A6NGH7 325 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 F6UZH7 168 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 IL7P13232 177 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 TVP23CQ96ET8 276 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
USE1-208ENST00000600970 PLA2G10O15496 165 aa10.97□□□□□ -0.65
USE1-208ENST00000600970 TCRBP04435 133 aa10.97□□□□□ -0.65
USE1-208ENST00000600970 ASB13Q8WXK3 278 aa10.97□□□□□ -0.65
USE1-208ENST00000600970 WDR61Q9GZS3 305 aaKnown RBP10.97□□□□□ -0.65
USE1-208ENST00000600970 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
USE1-208ENST00000600970 RPH3ALQ9UNE2 315 aa10.97□□□□□ -0.65
USE1-208ENST00000600970 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 PGPA6NDG6 321 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 IGLV2-8P01709 118 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 TOR2AQ5JU69 321 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 Q8N976 141 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 TREM1Q9NP99 234 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 COX11Q9Y6N1 276 aa10.96□□□□□ -0.65
USE1-208ENST00000600970 GGTLC3B5MD39 225 aa10.95□□□□□ -0.66
USE1-208ENST00000600970 LYRM1O43325 122 aa10.95□□□□□ -0.66
USE1-208ENST00000600970 MGST1P10620 155 aaKnown RBP10.95□□□□□ -0.66
USE1-208ENST00000600970 ACOT6Q3I5F7 207 aaPredicted RBP10.95□□□□□ -0.66
USE1-208ENST00000600970 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
USE1-208ENST00000600970 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
USE1-208ENST00000600970 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
USE1-208ENST00000600970 TRAV8-1A0A0A6YYK1 113 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 C17orf112F2Z3M2 114 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 KHDC3LQ587J8 217 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 NMES1Q9C002 83 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 NUDT15Q9NV35 164 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
USE1-208ENST00000600970 LINC00694P0DN24 101 aa10.93□□□□□ -0.66
USE1-208ENST00000600970 ZNF506Q5JVG8 444 aa10.93□□□□□ -0.66
USE1-208ENST00000600970 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
USE1-208ENST00000600970 RBM38Q9H0Z9 239 aaKnown RBP10.93□□□□□ -0.66
USE1-208ENST00000600970 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
USE1-208ENST00000600970 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
USE1-208ENST00000600970 HNRNPA3P51991 378 aaKnown RBP10.92□□□□□ -0.66
USE1-208ENST00000600970 TAS2R45P59539 299 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 GAGE1Q13065 139 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 GAGE4Q13068 117 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 GAGE5Q13069 117 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 GAGE13Q4V321 117 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 ARL6IP6Q8N6S5 226 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 PTH2Q96A98 100 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 RMI2Q96E14 147 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 OR5AC2Q9NZP5 309 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
USE1-208ENST00000600970 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
USE1-208ENST00000600970 ZNF80P51504 273 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms