RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RASL10A	Q92737	203 aa		10.72	□□□□□ -0.69
PLD3-223	ENST00000600948	MAP1LC3B	Q9GZQ8	125 aa		10.72	□□□□□ -0.69
PLD3-223	ENST00000600948	SDF2L1	Q9HCN8	221 aa		10.72	□□□□□ -0.69
PLD3-223	ENST00000600948	C11orf21	Q9P2W6	132 aa		10.72	□□□□□ -0.69
PLD3-223	ENST00000600948	NBDY	A0A0U1RRE5	68 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948		A0A1B0GVY2	172 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	FBLL1	A6NHQ2	334 aa	Known RBP	10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	FAM74A7	A6NL05	159 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	GCG	P01275	180 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	KCNS1	Q96KK3	526 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	LINC00479	Q96M42	142 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	PRO0255	Q9UI72	69 aa		10.71	□□□□□ -0.69
PLD3-223	ENST00000600948	DNAH2	Q9P225	4427 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	TRAV34	A0A0B4J273	112 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948		A0A0D9SG52	128 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	PRSS29P	A6NIE9	313 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	PEX7	O00628	323 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	PAX4	O43316	350 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	BCL2L11	O43521	198 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	IFNA7	P01567	189 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	SFTA3	P0C7M3	94 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	SEC11B	P0C7V7	166 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	FHIT	P49789	147 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	CRYBA4	P53673	196 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	SLA	Q13239	276 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	SMUG1	Q53HV7	270 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	ZNF479	Q96JC4	524 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	UPK3B	Q9BT76	320 aa		10.7	□□□□□ -0.7
PLD3-223	ENST00000600948	MRPS16	Q9Y3D3	137 aa	Known RBP	10.7	□□□□□ -0.7
PLD3-223	ENST00000600948		M0R2P5	195 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	PFN1	P07737	140 aa	Known RBP	10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	ZFP69	Q49AA0	526 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	SAPCD1	Q5SSQ6	148 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	C1orf134	Q5TEV5	83 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	ZNF471	Q9BX82	626 aa	Predicted RBP	10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	NKX6-2	Q9C056	277 aa	Predicted RBP	10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	HHLA3	Q9XRX5	114 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	ICOS	Q9Y6W8	199 aa		10.69	□□□□□ -0.7
PLD3-223	ENST00000600948	FAT2	Q9NYQ8	4349 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948	SOHLH1	Q5JUK2	328 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948		Q86TA4	180 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948	STOML3	Q8TAV4	291 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948	HIST1H2BA	Q96A08	127 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948		Q9H8V8	135 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948	ARL2-SNX15	V9GYD0	113 aa		10.68	□□□□□ -0.7
PLD3-223	ENST00000600948	TRAV4	A0A0B4J268	109 aa		10.67	□□□□□ -0.7
PLD3-223	ENST00000600948	TRGV4	A0A0C4DH28	118 aa		10.67	□□□□□ -0.7
PLD3-223	ENST00000600948	KANTR	A0A1W2PQU2	76 aa		10.67	□□□□□ -0.7
PLD3-223	ENST00000600948	PPT1	P50897	306 aa		10.67	□□□□□ -0.7
PLD3-223	ENST00000600948	UMAD1	C9J7I0	102 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	TMUB2	Q71RG4	321 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	C6orf223	Q8N319	242 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	FAM213B	Q8TBF2	198 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	MBD3L1	Q8WWY6	194 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	C9orf85	Q96MD7	179 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	KRTAP1-5	Q9BYS1	174 aa		10.66	□□□□□ -0.7
PLD3-223	ENST00000600948	MRPL23	Q16540	153 aa	Known RBP	10.65	□□□□□ -0.7
PLD3-223	ENST00000600948	OR4C5	Q8NGB2	326 aa		10.65	□□□□□ -0.7
PLD3-223	ENST00000600948	IGKV3D-20	A0A0C4DH25	116 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	PFDN1	O60925	122 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	RNASE3	P12724	160 aa	Known RBP	10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	EIF5A	P63241	154 aa	Known RBP	10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	TTC32	Q5I0X7	151 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	CST9LP1	Q5W188	147 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	DPPA3	Q6W0C5	159 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	COX8C	Q7Z4L0	72 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	SFT2D1	Q8WV19	159 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	TCEAL7	Q9BRU2	100 aa		10.64	□□□□□ -0.71
PLD3-223	ENST00000600948	FABP5P3	A8MUU1	101 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948		C9JCJ5	164 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948		K7EQD1	137 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	PAGE4	O60829	102 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	TPT1	P13693	172 aa	Known RBP	10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	ZNF876P	Q49A33	203 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	TCTE3	Q8IZS6	198 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	ZC2HC1A	Q96GY0	325 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	FMC1	Q96HJ9	113 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	ZFP30	Q9Y2G7	519 aa		10.63	□□□□□ -0.71
PLD3-223	ENST00000600948	TRBV6-1	A0A0K0K1D8	114 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948		A0A1B0GV50	99 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948		A0A1W2PPQ1	181 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	PGPEP1L	A6NFU8	196 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	RS1	O15537	224 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	ORM1	P02763	201 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	GYPE	P15421	78 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	GATA1	P15976	413 aa	Predicted RBP	10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	CRIP1	P50238	77 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	UBE2G1	P62253	170 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	LYPD5	Q6UWN5	251 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948		Q6ZNX1	250 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	NEGR1	Q7Z3B1	354 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	PTH2	Q96A98	100 aa		10.62	□□□□□ -0.71
PLD3-223	ENST00000600948	NXPH4	O95158	308 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	H2AFB1	P0C5Y9	115 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	SRI	P30626	198 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	TNP2	Q05952	138 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	ZNF506	Q5JVG8	444 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	CFAP126	Q5VTH2	177 aa		10.61	□□□□□ -0.71
PLD3-223	ENST00000600948	PCNP	Q8WW12	178 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms